RNA–Protein interactions for RNA: ENST00000456062.1

AC004872.1-201, humanhuman

TSL 3 BASIC

Gene AC004872.1, Length 469 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004872.1-201ENST00000456062 PLSCR3Q9NRY6 295 aa3.05□□□□□ -1.92
AC004872.1-201ENST00000456062 CALYQ9NYX4 217 aa3.05□□□□□ -1.92
AC004872.1-201ENST00000456062 ZMAT5Q9UDW3 170 aaKnown RBP3.05□□□□□ -1.92
AC004872.1-201ENST00000456062 MTRF1LQ9UGC7 380 aaKnown RBP3.05□□□□□ -1.92
AC004872.1-201ENST00000456062 CSDC2Q9Y534 153 aaKnown RBP3.05□□□□□ -1.92
AC004872.1-201ENST00000456062 ZNF646O15015 1829 aaPredicted RBP3.05□□□□□ -1.92
AC004872.1-201ENST00000456062 PIK3R4Q99570 1358 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 CHD4Q14839 1912 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 SMCO3A2RU48 225 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 RBMY1BA6NDE4 496 aaKnown RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 RBMY1EA6NEQ0 496 aaKnown RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 TRIM49D1C9J1S8 452 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 KRTAP4-16G5E9R7 235 aaPredicted RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 FAM189A1O60320 539 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 RBMY1DP0C7P1 496 aaKnown RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 RBMY1A1P0DJD3 496 aaKnown RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 TOP1P11387 765 aaKnown RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 ZNF19P17023 458 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 CCNCP24863 283 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 ATP5C1P36542 298 aaKnown RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 RBMXP38159 391 aaKnown RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 CAV2P51636 162 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 GNB2P62879 340 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 AP1ARQ63HQ0 302 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 IL34Q6ZMJ4 242 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 RFLNAQ6ZTI6 216 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 ZNF557Q8N988 423 aaPredicted RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 DCAF4L2Q8NA75 395 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 LINC01555Q8NAE3 123 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 C20orf203Q8NBC4 194 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 OR7G2Q8NG99 324 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 OR2G2Q8NGZ5 317 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 FANK1Q8TC84 345 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 RASL11BQ9BPW5 248 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 TMEM59Q9BXS4 323 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 FAM192AQ9GZU8 254 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 DEFB127Q9H1M4 99 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 SRMSQ9H3Y6 488 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 ASB8Q9H765 288 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 RRAGDQ9NQL2 400 aaPredicted RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 MMP26Q9NRE1 261 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 RAB20Q9NX57 234 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 NUFIP1Q9UHK0 495 aaKnown RBP3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 CFAP45Q9UL16 551 aa3.04□□□□□ -1.92
AC004872.1-201ENST00000456062 NSD2O96028 1365 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 A0A0G2JN53 185 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 TCP11X1B4DZS4 312 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 F8VZ95 297 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 GOSR2O14653 212 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 RNF13O43567 381 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 NPIPB7O75200 414 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 KLF8O95600 359 aaPredicted RBP3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 ZNF24P17028 368 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 OTX1P32242 354 aaPredicted RBP3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 RORAP35398 523 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 NPBWR2P48146 333 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 ACLYP53396 1101 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 CCNA1P78396 465 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 MECOMQ03112 1051 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 ENPEPQ07075 957 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 PDIA2Q13087 525 aaKnown RBP3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 PAGE3Q5JUK9 113 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 PRAMEF20Q5VT98 475 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 C6orf89Q6UWU4 347 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 H2AFVQ71UI9 128 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 C11orf53Q8IXP5 236 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 B3GNT7Q8NFL0 401 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 OR52K2Q8NGK3 314 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 OR6X1Q8NH79 312 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 PLPPR1Q8TBJ4 325 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 NDRG1Q92597 394 aaKnown RBP3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 MCUR1Q96AQ8 359 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 ELSPBP1Q96BH3 223 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 ZNF578Q96N58 590 aaPredicted RBP3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 NRTNQ99748 197 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 ECSITQ9BQ95 431 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 NEK6Q9HC98 313 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 XCL2Q9UBD3 114 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 CLCF1Q9UBD9 225 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 GNPTGQ9UJJ9 305 aa3.03□□□□□ -1.92
AC004872.1-201ENST00000456062 USP47Q96K76 1375 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 IGLV3-22A0A075B6J6 115 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 A0A075B6Q4 140 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 GJE1A6NN92 205 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 BOLA2-SMG1P6H3BVE0 249 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 KRT6AP02538 564 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 IGHV4-34P06331 123 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 TDGF1P13385 188 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 ZNF43P17038 809 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 ELK1P19419 428 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 HNRNPH3P31942 346 aaKnown RBP3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 FOXN2P32314 431 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 GPR6P46095 362 aaPredicted RBP3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 CSNK1DP48730 415 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 TDGF1P3P51864 188 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 SUB1P53999 127 aaKnown RBP eCLIP3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 CDH6P55285 790 aa3.02□□□□□ -1.93
AC004872.1-201ENST00000456062 ACVR1Q04771 509 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms