RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 MISPQ8IVT2 679 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 TOMM5Q8N4H5 51 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 LGALS14Q8TCE9 139 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 STK35Q8TDR2 534 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 INTS14Q96SY0 518 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 NUDT22Q9BRQ3 303 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 SEMA4CQ9C0C4 833 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 SYT4Q9H2B2 425 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 ING3Q9NXR8 418 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 COPZ2Q9P299 210 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 TMED7Q9Y3B3 224 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 FKBP7Q9Y680 259 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 V9GY05 133 aa13.64□□□□□ -0.23
LDLR-202ENST00000455727 TRBV5-5A0A0J9YX44 114 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 H7C1C5 153 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 XKRYO14609 159 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 ARHGEF9O43307 516 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 SUSD5O60279 629 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 DXOO77932 396 aaKnown RBP13.63□□□□□ -0.23
LDLR-202ENST00000455727 PNLIPP16233 465 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 S100A1P23297 94 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 BLVRAP53004 296 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 LCN6P62502 163 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 SHBQ15464 509 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 LANCL3Q6ZV70 420 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 RABEPKQ7Z6M1 372 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 ADGRG3Q86Y34 549 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 HSD17B8Q92506 261 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 HLA-CQ95604 372 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 ELF4Q99607 663 aaPredicted RBP13.63□□□□□ -0.23
LDLR-202ENST00000455727 SLITRK2Q9H156 845 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 DPAGT1Q9H3H5 408 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 SLC22A11Q9NSA0 550 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 CTSFQ9UBX1 484 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 LAMA1P25391 3075 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 TVP23AA6NH52 213 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 KHNYNO15037 678 aaKnown RBP13.63□□□□□ -0.23
LDLR-202ENST00000455727 GMFGO60234 142 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 RPP14O95059 124 aaKnown RBP13.63□□□□□ -0.23
LDLR-202ENST00000455727 AKR7A3O95154 331 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 DHFRP00374 187 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 RAF1P04049 648 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 MYF5P13349 255 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 DPP4P27487 766 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 ERP29P30040 261 aaKnown RBP13.63□□□□□ -0.23
LDLR-202ENST00000455727 ARRB1P49407 418 aaPredicted RBP13.63□□□□□ -0.23
LDLR-202ENST00000455727 RPL27P61353 136 aaKnown RBP13.63□□□□□ -0.23
LDLR-202ENST00000455727 RNF4P78317 190 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 DYRK1AQ13627 763 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 FAM199XQ6PEV8 388 aaPredicted RBP13.63□□□□□ -0.23
LDLR-202ENST00000455727 ZNF519Q8TB69 540 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 STT3BQ8TCJ2 826 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 SMIM4Q8WVI0 70 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 METTL21AQ8WXB1 218 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 AKAP1Q92667 903 aaKnown RBP eCLIP13.63□□□□□ -0.232e-10■■■■■ 36.2
LDLR-202ENST00000455727 CCDC74AQ96AQ1 378 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 ZFP3Q96NJ6 502 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 NIPAL2Q9H841 368 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 ZNF275Q9NSD4 429 aaPredicted RBP13.63□□□□□ -0.23
LDLR-202ENST00000455727 CLEC4AQ9UMR7 237 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 NUBP2Q9Y5Y2 271 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 EXPH5Q8NEV8 1989 aa13.63□□□□□ -0.23
LDLR-202ENST00000455727 CPAMD8Q8IZJ3 1885 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 PRSS37A4D1T9 235 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 CCDC85CA6NKD9 419 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 C17orf51A8MQB3 221 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 AGRPO00253 132 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 ADAM10O14672 748 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 IGHMP01871 453 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 CALCBP10092 127 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 SRP9P49458 86 aaKnown RBP13.62□□□□□ -0.23
LDLR-202ENST00000455727 SLC26A5P58743 744 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 DGCR2P98153 550 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 EFR3AQ14156 821 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 C1orf140Q5VVS0 124 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 FDX2Q6P4F2 183 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 POMZP3Q6PJE2 187 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 DPY19L4Q7Z388 723 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 PM20D2Q8IYS1 436 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 CMTM4Q8IZR5 234 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 OR6N2Q8NGY6 317 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 OR2G2Q8NGZ5 317 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 OTOSQ8NHW6 89 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 BEX2Q9BXY8 128 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 TXNIPQ9H3M7 391 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 TAS2R10Q9NYW0 307 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 B9D1Q9UPM9 204 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 TMEM212A6NML5 194 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 OR4C45A6NMZ5 311 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 SCO2O43819 266 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 OR2T1O43869 369 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 CD3GP09693 182 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 ACY1Q03154 408 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 SLC22A10Q63ZE4 541 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 STAC2Q6ZMT1 411 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 SIAH3Q8IW03 269 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 ASCC1Q8N9N2 400 aaKnown RBP13.62□□□□□ -0.23
LDLR-202ENST00000455727 OR6S1Q8NH40 331 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 DUSP19Q8WTR2 217 aa13.62□□□□□ -0.23
LDLR-202ENST00000455727 SLC25A18Q9H1K4 315 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms