RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 FAM173AQ9BQD7 235 aa4.4□□□□□ -1.71
RIF1-207ENST00000454583 MMP27Q9H306 513 aa4.4□□□□□ -1.71
RIF1-207ENST00000454583 EQTNQ9NQ60 294 aa4.4□□□□□ -1.71
RIF1-207ENST00000454583 ENOPH1Q9UHY7 261 aa4.4□□□□□ -1.71
RIF1-207ENST00000454583 RAXQ9Y2V3 346 aa4.4□□□□□ -1.71
RIF1-207ENST00000454583 ZNF337Q9Y3M9 751 aa4.4□□□□□ -1.71
RIF1-207ENST00000454583 OR2M5A3KFT3 312 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 A8MUA0 341 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 LRRN3E7EW58 273 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 CBR3O75828 277 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 MMP7P09237 267 aaPredicted RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 SPNP16150 400 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 CDKN2AP42771 156 aaKnown RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 PGDP52209 483 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 PPIAP62937 165 aaKnown RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 FABP5Q01469 135 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 OR1C1Q15619 314 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 NNATQ16517 81 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 NRN1LQ496H8 165 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 FAAH2Q6GMR7 532 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SMARCD3Q6STE5 483 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 C5orf46Q6UWT4 87 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 ZNF550Q7Z398 422 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 BIVMQ86UB2 503 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 RAB43Q86YS6 212 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 C20orf196Q8IYI0 205 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 IQCF1Q8N6M8 205 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 MOSPD2Q8NHP6 518 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 ST7LQ8TDW4 575 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 PNPLA2Q96AD5 504 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SDCCAG3Q96C92 435 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 LRR1Q96L50 414 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 ATF6BQ99941 703 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 LINC00470Q9BZP3 86 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SRRQ9GZT4 340 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 ASB6Q9NWX5 421 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 CLCA3PQ9Y6N3 262 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SHISA8B8ZZ34 492 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 H0YC42 278 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 MAGEB3O15480 346 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SERPINB7O75635 380 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 UPK1BO75841 260 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 MT-ATP6P00846 226 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 IL1AP01583 271 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 BMP7P18075 431 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 TACR3P29371 465 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 GABRA5P31644 462 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 HTR3AP46098 478 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 TPD52P55327 224 aaPredicted RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 RAC1P63000 192 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 TIGD6Q17RP2 521 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 OPN5Q6U736 354 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 ZNF322Q6U7Q0 402 aaPredicted RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 C22orf34Q6ZV56 151 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SLC29A4Q7RTT9 530 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 C16orf62Q7Z3J2 963 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SVOPQ8N4V2 548 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 NEIL3Q8TAT5 605 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 FAM81AQ8TBF8 368 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 THAP3Q8WTV1 239 aaPredicted RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 SLC9A6Q92581 669 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 MYDGFQ969H8 173 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 TRIM63Q969Q1 353 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 MCHR1Q99705 422 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 TRIM2Q9C040 744 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SP140LQ9H930 580 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 VCX3AQ9NNX9 186 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 ZFP64Q9NPA5 681 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SACM1LQ9NTJ5 587 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 TXNL4BQ9NX01 149 aaKnown RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 MED11Q9P086 117 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 BLOC1S6Q9UL45 172 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 OR6C68A6NDL8 312 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 ZNF724A8MTY0 619 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 FADS2O95864 444 aaKnown RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 PNMTP11086 282 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 CD36P16671 472 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 PTBP1P26599 531 aaKnown RBP eCLIP4.39□□□□□ -1.71
RIF1-207ENST00000454583 CCKARP32238 428 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 MNDAP41218 407 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 CLDN20P56880 219 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SMIM11AP58511 58 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SLC10A1Q14973 349 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 GPR68Q15743 365 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 BTBD16Q32M84 506 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 FBXL19-AS1Q494R0 122 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 EEF1A1P5Q5VTE0 462 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 COLCA1Q6ZS62 124 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 USP43Q70EL4 1123 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 CDC20BQ86Y33 519 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 LIX1LQ8IVB5 337 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 ZNF584Q8IVC4 421 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 PLPP7Q8NBV4 271 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 ZNF540Q8NDQ6 660 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 SLC22A8Q8TCC7 542 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 LZICQ8WZA0 190 aa4.39□□□□□ -1.71
RIF1-207ENST00000454583 GTPBP3Q969Y2 492 aaKnown RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 KIAA1143Q96AT1 154 aaPredicted RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 FAM46AQ96IP4 442 aaKnown RBP4.39□□□□□ -1.71
RIF1-207ENST00000454583 C5orf34Q96MH7 638 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms