RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TPST1O60507 370 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DEAF1O75398 565 aaPredicted RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 VAMP5O95183 116 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ANP32DO95626 131 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TFP02787 698 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 BGLAPP02818 100 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OPN1SWP03999 348 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR8G3PP0DMU2 310 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ARAFP10398 606 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF35P13682 527 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ACHEP22303 614 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZFP36P26651 326 aaKnown RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FKBP2P26885 142 aaKnown RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 COMPP49747 757 aaPredicted RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RPL14P50914 215 aaKnown RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 BIDP55957 195 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NCALDP61601 193 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SEC61A1P61619 476 aaKnown RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 UBA52P62987 128 aaKnown RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CBX1P83916 185 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MYBPC1Q00872 1141 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GALK2Q01415 458 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DEFA6Q01524 100 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SRSF4Q08170 494 aaKnown RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LARS2Q15031 903 aaKnown RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FXNQ16595 210 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DPY19L1Q2PZI1 675 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TRMT5Q32P41 509 aaKnown RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C3orf36Q3SXR2 165 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC9B1Q4ZJI4 515 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MIDNQ504T8 468 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ALG10BQ5I7T1 473 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CEP85LQ5SZL2 805 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FAM69AQ5T7M9 428 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 WDR88Q6ZMY6 472 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 USP51Q70EK9 711 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C1QL2Q7Z5L3 287 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C20orf196Q8IYI0 205 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 BCL6BQ8N143 479 aaPredicted RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RIBC1Q8N443 379 aaPredicted RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 BPIFB2Q8N4F0 458 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR6N1Q8NGY5 312 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 STK35Q8TDR2 534 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FAM216AQ8WUB2 273 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OIT3Q8WWZ8 545 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GEMIN6Q8WXD5 167 aaKnown RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RDH5Q92781 318 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZMYND19Q96E35 227 aaPredicted RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 BOD1Q96IK1 185 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C1orf147Q96MC9 270 aaPredicted RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OXGR1Q96P68 337 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF317Q96PQ6 595 aaPredicted RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR52B2Q96RD2 323 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZBTB18Q99592 522 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FOXB1Q99853 325 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GAL3ST1Q99999 423 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SPATA9Q9BWV2 254 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 IKZF5Q9H5V7 419 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MTHFD2LQ9H903 347 aaPredicted RBP5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TPT1P8Q9HAU6 139 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RPS6KB2Q9UBS0 482 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OPN4Q9UHM6 478 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 WIPI2Q9Y4P8 454 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GPR45Q9Y5Y3 372 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TRAV36DV7A0A075B6V5 113 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 A0A096LPI6 279 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TRAV20A0A0B4J274 112 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 A0A0G2JMP0 313 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 A0A0X1KG70 313 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TMEM89A2RUT3 159 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZSCAN5BA6NJL1 495 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MS4A18H0YCH9 400 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TRIM77I1YAP6 450 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TPD52L2O43399 206 aaKnown RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 AKAP8O43823 692 aaKnown RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TPST2O60704 377 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PRSS23O95084 383 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 KRT75O95678 551 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 IGHV2-5P01817 119 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LCKP06239 509 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PCMT1P22061 227 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OMGP23515 440 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 AHCYP23526 432 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MPV17P39210 176 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CSNK1A1P48729 337 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ANXA11P50995 505 aaKnown RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ARFIP2P53365 341 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 KLF3P57682 345 aaPredicted RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RGS8P57771 180 aaPredicted RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RAB1AP62820 205 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PUDPQ08623 228 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RBBP4Q09028 425 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PMS2P3Q13401 168 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GSTA3Q16772 222 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MS4A18Q3C1V0 323 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DCAF12L2Q5VW00 463 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RGS7BPQ6MZT1 257 aaPredicted RBP5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OGFOD2Q6N063 350 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C6orf89Q6UWU4 347 aa5.1□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NHLRC1Q6VVB1 395 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms