RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 SAGP10523 405 aaPredicted RBP7.82□□□□□ -1.16
COL8A1-203ENST00000452013 HLA-DOBP13765 273 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 HOXB1P14653 301 aaPredicted RBP7.82□□□□□ -1.16
COL8A1-203ENST00000452013 IFNGR1P15260 489 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 ZNF26P17031 533 aaPredicted RBP7.82□□□□□ -1.16
COL8A1-203ENST00000452013 HOXC12P31275 282 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 CCKARP32238 428 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 AQP2P41181 271 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 SLC9A3P48764 834 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 LSAMPQ13449 338 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 APOFQ13790 326 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 LAPTM4AQ15012 233 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 TSC22D1Q15714 1073 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 TAB1Q15750 504 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 STK11Q15831 433 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 GABRA6Q16445 453 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 CNPY1Q3B7I2 92 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 C11orf91Q3C1V1 193 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 KCTD21Q4G0X4 260 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 FGD3Q5JSP0 725 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 DOPEY1Q5JWR5 2465 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 ALKBH2Q6NS38 261 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 PODNL1Q6PEZ8 512 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 TBPL2Q6SJ96 375 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 NHLRC1Q6VVB1 395 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 TMPRSS11FQ6ZWK6 438 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 SLC46A3Q7Z3Q1 461 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 PIWIL3Q7Z3Z3 882 aaKnown RBP7.82□□□□□ -1.16
COL8A1-203ENST00000452013 HDDC2Q7Z4H3 204 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 OAFQ86UD1 273 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 LSRQ86X29 649 aaPredicted RBP7.82□□□□□ -1.16
COL8A1-203ENST00000452013 WFDC8Q8IUA0 241 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 ZDHHC21Q8IVQ6 265 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 NRMQ8IXM6 262 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 C20orf196Q8IYI0 205 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 C17orf78Q8N4C9 275 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 FAM86B1Q8N7N1 296 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 PAPD5Q8NDF8 572 aaKnown RBP7.82□□□□□ -1.16
COL8A1-203ENST00000452013 C1orf162Q8NEQ5 155 aaPredicted RBP7.82□□□□□ -1.16
COL8A1-203ENST00000452013 OR6N1Q8NGY5 312 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 OR6X1Q8NH79 312 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 SLC7A13Q8TCU3 470 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 TXNDC15Q96J42 360 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 LURAP1Q96LR2 239 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 OR2M2Q96R28 347 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 PKP2Q99959 881 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 EMC6Q9BV81 110 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 ANKRD60Q9BZ19 345 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 CLEC4MQ9H2X3 399 aaPredicted RBP7.82□□□□□ -1.16
COL8A1-203ENST00000452013 ESRP2Q9H6T0 727 aaKnown RBP7.82□□□□□ -1.16
COL8A1-203ENST00000452013 INIPQ9NRY2 104 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 MAN2C1Q9NTJ4 1040 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 C20orf141Q9NUB4 165 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 AURKCQ9UQB9 309 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 SVILO95425 2214 aa7.82□□□□□ -1.16
COL8A1-203ENST00000452013 USP9XQ93008 2570 aaPredicted RBP7.81□□□□□ -1.16
COL8A1-203ENST00000452013 TCRBV5S2A0A599 114 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 MCIDASD6RGH6 385 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 KLF4O43474 513 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 RAD51DO75771 328 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 DIRAS1O95057 198 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 WNT11O96014 354 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 HRGP04196 525 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 ITGA5P08648 1049 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 ZNF23P17027 643 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 CDH2P19022 906 aaPredicted RBP7.81□□□□□ -1.16
COL8A1-203ENST00000452013 MAKP20794 623 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 ATP6V1B2P21281 511 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 FASP25445 335 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 CSNK1A1P48729 337 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 DAP3P51398 398 aaKnown RBP7.81□□□□□ -1.16
COL8A1-203ENST00000452013 HMGA2P52926 109 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 BIDP55957 195 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 PRPS1P60891 318 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 SPIBQ01892 262 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 RPL18Q07020 188 aaKnown RBP7.81□□□□□ -1.16
COL8A1-203ENST00000452013 CAMK2DQ13557 499 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 PPA1Q15181 289 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 LRRC36Q1X8D7 754 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 ZBED5Q49AG3 693 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 IQCCQ4KMZ1 466 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 ALG10Q5BKT4 473 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 C9orf135Q5VTT2 229 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 CARD17Q5XLA6 110 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 KRT80Q6KB66 452 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 ANKRD16Q6P6B7 361 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 KLHL17Q6TDP4 642 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 KLHL24Q6TFL4 600 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 ZBTB49Q6ZSB9 765 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 C22orf34Q6ZV56 151 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 CDC20BQ86Y33 519 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 CCDC36Q8IYA8 594 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 TMEM123Q8N131 208 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 LINC00471Q8N535 108 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 OR52J3Q8NH60 311 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 OR51A7Q8NH64 312 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 ZNF566Q969W8 418 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 PIK3IP1Q96FE7 263 aa7.81□□□□□ -1.16
COL8A1-203ENST00000452013 CENPNQ96H22 339 aaPredicted RBP7.81□□□□□ -1.16
COL8A1-203ENST00000452013 SLC25A44Q96H78 314 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms