RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 PRR33A8MZF0 331 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 FZD7O75084 574 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 RGS9O75916 674 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 CDRT1O95170 752 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 SNX4O95219 450 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 SERPINA3P01011 423 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 SERPINA7P05543 415 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 CD1AP06126 327 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 TACSTD2P09758 323 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 TFPIP10646 304 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 CD40LGP29965 261 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ACVR1BP36896 505 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 RPS19P39019 145 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 DAP3P51398 398 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 FABP5Q01469 135 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ZNF45Q02386 682 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 PUDPQ08623 228 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 SELENBP1Q13228 472 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 TRIP6Q15654 476 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 TBC1D25Q3MII6 688 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 CDONQ4KMG0 1287 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 CCDC58Q4VC31 144 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 HES3Q5TGS1 186 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 EEF1A1P5Q5VTE0 462 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 SLC6A19Q695T7 634 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 H3F3CQ6NXT2 135 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 DHRS13Q6UX07 377 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 PLEKHG7Q6ZR37 379 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 EXD3Q8N9H8 876 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ADPRHL1Q8NDY3 354 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ZNF417Q8TAU3 575 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ANAPC16Q96DE5 110 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 IP6K3Q96PC2 410 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ZNF587Q96SQ5 575 aaPredicted RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 PRRX2Q99811 253 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 TMED9Q9BVK6 235 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 OR11A1Q9GZK7 315 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 ISG20L2Q9H9L3 353 aaKnown RBP9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 CHST11Q9NPF2 352 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 FANCFQ9NPI8 374 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 SACM1LQ9NTJ5 587 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 NCDNQ9UBB6 729 aa9.53□□□□□ -0.88
VIPAS39-203ENST00000448935 CPAMD8Q8IZJ3 1885 aa9.52□□□□□ -0.88
VIPAS39-203ENST00000448935 IQCMA0A1B0GVH7 501 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 PRSS37A4D1T9 235 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 HSPB2A8KAH6 182 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 CENPBD1B2RD01 187 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 GABRPO00591 440 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 SEC14L5O43304 696 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 PF4P02776 101 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 TFP02787 698 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 CELA2AP08217 269 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 CELA3AP09093 270 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 ZNF12P17014 697 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 CFL1P23528 166 aaKnown RBP9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 CRABP1P29762 137 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 NAA10P41227 235 aaPredicted RBP9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 PPP5CP53041 499 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 TLE3Q04726 772 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 OR7A5Q15622 319 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 HSPB2Q16082 182 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 ACKR1Q16570 336 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 LINC01590Q5TEZ4 76 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 JMJD6Q6NYC1 403 aaPredicted RBP9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 DNM1P34Q6PK57 102 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 PAMR1Q6UXH9 720 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 HDDC2Q7Z4H3 204 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 ZFP41Q8N8Y5 198 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 OR51L1Q8NGJ5 315 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 ZNF519Q8TB69 540 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 ZPLD1Q8TCW7 415 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 SLC25A46Q96AG3 418 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 TRMT61AQ96FX7 289 aaKnown RBP9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 TMEM41AQ96HV5 264 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 CEP19Q96LK0 163 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 C5orf34Q96MH7 638 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 TIMP4Q99727 224 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 TM9SF2Q99805 663 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 SNTG1Q9NSN8 517 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 VSX1Q9NZR4 365 aaPredicted RBP9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 HDGFL3Q9Y3E1 203 aa9.52□□□□□ -0.89
VIPAS39-203ENST00000448935 A0A1W2PNV4 684 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 LIPT2A6NK58 231 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 NPIPA5E9PKD4 350 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 CASKO14936 926 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 OGG1O15527 345 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 GPRIN2O60269 458 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 P04436 131 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 BMP4P12644 408 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 PYCR1P32322 319 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 DLSTP36957 453 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 DSCR4P56555 118 aaPredicted RBP9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 OR12D2P58182 307 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 RPS18P62269 152 aaKnown RBP9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 SPANXN2Q5MJ10 180 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 PRAMEF20Q5VT98 475 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 DMKNQ6E0U4 476 aaPredicted RBP9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 RPL22L1Q6P5R6 122 aaKnown RBP9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 FAM220AQ7Z4H9 259 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 PXKQ7Z7A4 578 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms