RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 EMC9Q9Y3B6 208 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 PTRH2Q9Y3E5 179 aaKnown RBP7.19□□□□□ -1.26
NEDD9-204ENST00000448183 CORINQ9Y5Q5 1042 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 A0A087WZY1 265 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 TRBV11-1A0A0K0K1C0 115 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 AIPO00170 330 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 LAMTOR5O43504 91 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 MTHFD2P13995 350 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF93P35789 620 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-204ENST00000448183 F2RL1P55085 397 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 CLINT1Q14677 625 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 SHEQ5VZ18 495 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 NPSR1Q6W5P4 371 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 PRICKLE2Q7Z3G6 844 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 SYT9Q86SS6 491 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 OR5D18Q8NGL1 313 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 OR14A16Q8NHC5 309 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 DUS3LQ96G46 650 aaKnown RBP7.19□□□□□ -1.26
NEDD9-204ENST00000448183 CTRCQ99895 268 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 WDR83Q9BRX9 315 aaKnown RBP7.19□□□□□ -1.26
NEDD9-204ENST00000448183 CDCA4Q9BXL8 241 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 OR51B6Q9H340 312 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 PLSCR5A0PG75 271 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 C2orf72A6NCS6 295 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 ECI1P42126 302 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 NDUFA6P56556 154 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 RNF4P78317 190 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 TEKQ02763 1124 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 HNF4GQ14541 408 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 CTU2Q2VPK5 515 aaKnown RBP7.19□□□□□ -1.26
NEDD9-204ENST00000448183 TMEM176BQ3YBM2 270 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-204ENST00000448183 SLC48A1Q6P1K1 146 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 ALKAL1Q6UXT8 129 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 RFLNAQ6ZTI6 216 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 TAS1R1Q7RTX1 841 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 MISPQ8IVT2 679 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 FAM26EQ8N5C1 309 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 SLC6A18Q96N87 628 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 GPR78Q96P69 363 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 NKX3-1Q99801 234 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-204ENST00000448183 MYOTQ9UBF9 498 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 KPTNQ9Y664 436 aa7.19□□□□□ -1.26
NEDD9-204ENST00000448183 P2RY10O00398 339 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 CLN5O75503 358 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 GLCEO94923 617 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 CHRM2P08172 466 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 SPI1P17947 270 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TNFSF4P23510 183 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 GDF1P27539 372 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 SNCAP37840 140 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 EPHA4P54764 986 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 MFSD12Q6NUT3 480 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 S100A7AQ86SG5 101 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TEX19Q8NA77 164 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 LFNGQ8NES3 379 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 OR52H1Q8NGJ2 320 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 OR51S1Q8NGJ8 323 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 DYNC2LI1Q8TCX1 351 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TCTN2Q96GX1 697 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 SGPP1Q9BX95 441 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 CHST8Q9H2A9 424 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 EPHX3Q9H6B9 360 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 OR14J1Q9UGF5 321 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 CA14Q9ULX7 337 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 MYH1P12882 1939 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 MYH4Q9Y623 1939 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 A0A087WUU8 490 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 ZBTB42B2RXF5 422 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 EDIL3O43854 480 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 SLCO2B1O94956 709 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 SRP9P49458 86 aaKnown RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 PFN3P60673 137 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 ZP2Q05996 745 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 IKZF1Q13422 519 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 BAK1Q16611 211 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 RNLSQ5VYX0 342 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 ADAM5Q6NVV9 412 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TMEM207Q6UWW9 146 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 C17orf99Q6UX52 265 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 RTL10Q7L3V2 364 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 PRSS45Q7RTY3 260 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 OVCH1Q7RTY7 1134 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 VRK3Q8IV63 474 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 LGI3Q8N145 548 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF296Q8WUU4 475 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 MBOAT4Q96T53 435 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 ZMAT3Q9HA38 289 aaKnown RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 RNF186Q9NXI6 227 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TRAPPC2LQ9UL33 140 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 NHSL1Q5SYE7 1610 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 NWD2Q9ULI1 1742 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 FAM155AB1AL88 458 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 HCRTR1O43613 425 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 MRPL33O75394 65 aaKnown RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 GPX5O75715 221 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 MT-ND4LP03901 98 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 SBK2P0C263 348 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 LAP3P28838 519 aa7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TRHRP34981 398 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-204ENST00000448183 TAGLN2P37802 199 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms