RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 BGNP21810 368 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 HTR2CP28335 458 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 ADORA2BP29275 332 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 RPL29P47914 159 aaKnown RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 TFPI2P48307 235 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 SSR4P51571 173 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 ATP12AP54707 1039 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 BIDP55957 195 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 LINC01547P58512 204 aaPredicted RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 KRTAP10-9P60411 292 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 CSNK1G2P78368 415 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 CHRNB3Q05901 458 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 SLC10A1Q14973 349 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 ARL6IP1Q15041 203 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 SIX1Q15475 284 aaPredicted RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 MAPRE2Q15555 327 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 MICAQ29983 383 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 PGGHGQ32M88 737 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 PAN3Q58A45 887 aaKnown RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 TPRG1LQ5T0D9 272 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 GPRC6AQ5T6X5 926 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 ADNP2Q6IQ32 1131 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 SYCE2Q6PIF2 218 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 ZNF621Q6ZSS3 439 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 NKAIN4Q8IVV8 208 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 NELFCDQ8IXH7 590 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 NRMQ8IXM6 262 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 SYS1Q8N2H4 156 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 FTMTQ8N4E7 242 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 DNAAF3Q8N9W5 541 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 AQP11Q8NBQ7 271 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 OR7G1Q8NGA0 311 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 SSC4DQ8WTU2 575 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 TAF15Q92804 592 aaKnown RBP eCLIP3.1□□□□□ -1.91
PMS1-216ENST00000447734 PAGE5Q96GU1 130 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 CPB2Q96IY4 423 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 POM121L2Q96KW2 1035 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 OR5B12Q96R08 314 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 PELOQ9BRX2 385 aaKnown RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 MED10Q9BTT4 135 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 UPF3BQ9BZI7 483 aaKnown RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 OCR1Q9BZK8 76 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 CHIAQ9BZP6 476 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 ACTR6Q9GZN1 396 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 NAA50Q9GZZ1 169 aaKnown RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 PATZ1Q9HBE1 687 aaKnown RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 PLCXD1Q9NUJ7 323 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 EURLQ9NYK6 297 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 SPRR3Q9UBC9 169 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 B4GALT7Q9UBV7 327 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 DCDC2Q9UHG0 476 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 LGALS13Q9UHV8 139 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 UBQLN1Q9UMX0 589 aaKnown RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 RCL1Q9Y2P8 373 aaKnown RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 AK9Q5TCS8 1911 aa3.1□□□□□ -1.91
PMS1-216ENST00000447734 BRD4O60885 1362 aaPredicted RBP3.1□□□□□ -1.91
PMS1-216ENST00000447734 AQRO60306 1485 aaKnown RBP eCLIP3.09□□□□□ -1.91
PMS1-216ENST00000447734 IGHV4-30-2A0A087WSY4 118 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 A0A1B0GTH9 108 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 MGAT4DA6NG13 374 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 USP27XA6NNY8 438 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 MPTX1A8MV57 137 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 SLC9A3R1O14745 358 aaPredicted RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 SCN2BO60939 215 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 BMP15O95972 392 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 HBE1P02100 147 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 KLK3P07288 261 aaPredicted RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 CT45A10P0DMU9 189 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 PSMC3P17980 439 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 IVDP26440 423 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 CD40LGP29965 261 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 OR1E1P30953 314 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 SHMT2P34897 504 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 GCKP35557 465 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 RFC3P40938 356 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 BLVRAP53004 296 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 PLK1P53350 603 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 MYL6P60660 151 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 ACTA2P62736 377 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 ACTG2P63267 376 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 ACTC1P68032 377 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 ACTA1P68133 377 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 CTAG1AP78358 180 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 ECH1Q13011 328 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 FHL1Q13642 323 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 SERTAD2Q14140 314 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 PSMD5Q16401 504 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 C17orf58Q2M2W7 97 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 NSUN5P1Q3KNT7 163 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 PARP15Q460N3 678 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 UTF1Q5T230 341 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 ADAMTSL4-AS1Q5T5F5 129 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 PTRHD1Q6GMV3 140 aaKnown RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 RFWD3Q6PCD5 774 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 GDPD3Q7L5L3 318 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 BHLHA15Q7RTS1 189 aaPredicted RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 BHLHA9Q7RTU4 235 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 OR2W3Q7Z3T1 314 aa3.09□□□□□ -1.91
PMS1-216ENST00000447734 ABHD12BQ7Z5M8 362 aaPredicted RBP3.09□□□□□ -1.91
PMS1-216ENST00000447734 LRRTM1Q86UE6 522 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms