RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 A0A1W2PQF6 199 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 ANXA2P2A6NMY6 339 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 BLOC1S5-TXNDC5H3BN57 136 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 RP2O75695 350 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 ANXA2P07355 339 aaKnown RBP17.36■□□□□ 0.37
SDCBP-204ENST00000447182 CSF1P09603 554 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 PNMTP11086 282 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 IGLV3-21P80748 117 aaPredicted RBP17.36■□□□□ 0.37
SDCBP-204ENST00000447182 ALG11Q2TAA5 492 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 PCGF3Q3KNV8 242 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 SDR16C5Q8N3Y7 309 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 BCORP1Q8N888 145 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 OR52B4Q8NGK2 314 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 OR4C16Q8NGL9 310 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 HERVK_113Q902F9 699 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 OR1F2PQ96R84 312 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 MNTQ99583 582 aa17.36■□□□□ 0.37
SDCBP-204ENST00000447182 TRAV8-7A0A075B6U6 113 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 C4orf47A7E2U8 309 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 HCRTR1O43613 425 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 SERPINI2O75830 405 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 MYOGP15173 224 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 PPP3CBP16298 524 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 COL9A1P20849 921 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 GPR3P46089 330 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.35■□□□□ 0.37
SDCBP-204ENST00000447182 WBP2NLQ6ICG8 309 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 ANKRD16Q6P6B7 361 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 TMUB2Q71RG4 321 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 OVCH2Q7RTZ1 564 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 LSM14AQ8ND56 463 aaKnown RBP17.35■□□□□ 0.37
SDCBP-204ENST00000447182 OR6N1Q8NGY5 312 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 OR2G2Q8NGZ5 317 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 LINC00052Q96N35 136 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 GINS4Q9BRT9 223 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 ZNF346Q9UL40 294 aaKnown RBP17.35■□□□□ 0.37
SDCBP-204ENST00000447182 MPDZO75970 2070 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 GGT3PA6NGU5 568 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 ELOA3DA6NLF2 546 aaPredicted RBP17.35■□□□□ 0.37
SDCBP-204ENST00000447182 TMEM212A6NML5 194 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 HSPB2A8KAH6 182 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 GABRA1P14867 456 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 H2BFSP57053 126 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 UBE2IP63279 158 aaKnown RBP17.35■□□□□ 0.37
SDCBP-204ENST00000447182 GPM6BQ13491 265 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 HSPB2Q16082 182 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 ELOA3BQ3SY89 546 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 KLHL26Q53HC5 615 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 ALG10Q5BKT4 473 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 EMC4Q5J8M3 183 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 SFRP5Q5T4F7 317 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 MAMSTRQ6ZN01 415 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 ATG4DQ86TL0 474 aaPredicted RBP17.35■□□□□ 0.37
SDCBP-204ENST00000447182 ELOA3Q8NG57 546 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 PATE1Q8WXA2 126 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 ZNF578Q96N58 590 aaPredicted RBP17.35■□□□□ 0.37
SDCBP-204ENST00000447182 COMMD4Q9H0A8 199 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 PRELID1Q9Y255 219 aa17.35■□□□□ 0.37
SDCBP-204ENST00000447182 A8MXK9 166 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 KRBOX1C9JBD0 128 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 ASAH2BP0C7U1 165 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 POU3F2P20265 443 aaPredicted RBP17.34■□□□□ 0.37
SDCBP-204ENST00000447182 HNRNPA2B1P22626 353 aaKnown RBP17.34■□□□□ 0.37
SDCBP-204ENST00000447182 NUP62P37198 522 aaPredicted RBP17.34■□□□□ 0.37
SDCBP-204ENST00000447182 CTXN1P60606 82 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 EGR3Q06889 387 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 PLA2G7Q13093 441 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 MPPED2Q15777 294 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 OR5M1Q8NGP8 315 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 GPR148Q8TDV2 347 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 ASB13Q8WXK3 278 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 SHARPINQ9H0F6 387 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 MMP25Q9NPA2 562 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 LAMP5Q9UJQ1 280 aa17.34■□□□□ 0.37
SDCBP-204ENST00000447182 ARPC4-TTLL3A0A0A6YYG9 625 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 TRIM77I1YAP6 450 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 DCTN6O00399 190 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 ARPC5O15511 151 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 MAS1P04201 325 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 RNH1P13489 461 aaKnown RBP17.33■□□□□ 0.37
SDCBP-204ENST00000447182 CSF2RBP32927 897 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 ADH7P40394 386 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 OR2AK2Q8NG84 335 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 C16orf52Q8NHV5 167 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 ZDHHC1Q8WTX9 485 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 MCHR2Q969V1 340 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 TMEM106AQ96A25 262 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 CXorf58Q96LI9 332 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 MOGAT1Q96PD6 335 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 DPYSL5Q9BPU6 564 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 WDR76Q9H967 626 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 OR10H1Q9Y4A9 318 aa17.33■□□□□ 0.37
SDCBP-204ENST00000447182 LRP4O75096 1905 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 BLACEA4D250 179 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 CTAG2O75638 210 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 HOXB2P14652 356 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 ALOX5APP20292 161 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 PGDP52209 483 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 RASGEF1BQ0VAM2 473 aa17.33■□□□□ 0.36
SDCBP-204ENST00000447182 TUSC1Q2TAM9 212 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms