RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 NOSIPQ9Y314 301 aaKnown RBP3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 ABCA7Q8IZY2 2146 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 RICTORQ6R327 1708 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 VWDEQ8N2E2 1590 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 IGHV3-16A0A0C4DH30 117 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR6C74A6NCV1 312 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 K7ENP7 123 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 DCTN6O00399 190 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 PPP1R2P9O14990 202 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 FCN3O75636 299 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 NOL4O94818 638 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 CCNB2O95067 398 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 SCELO95171 688 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC2A10O95528 541 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 LALBAP00709 142 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 C2P06681 752 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 ADORA2BP29275 332 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 GPR4P46093 362 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 RPL29P47914 159 aaKnown RBP3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 FBXW4P57775 412 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 YWHAEP62258 255 aaKnown RBP3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 ERVK-25P63136 954 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC10A7Q0GE19 358 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 CDH17Q12864 832 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 FAM182AQ5T1J6 154 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 C9orf66Q5T8R8 295 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 METTL11BQ5VVY1 283 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 STUMQ69YW2 141 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 UFSP1Q6NVU6 142 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 REG3GQ6UW15 175 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 FRA10AC1Q70Z53 315 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 MRPL21Q7Z2W9 205 aaKnown RBP3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 HDDC2Q7Z4H3 204 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 C9orf40Q8IXQ3 194 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 ABHD12Q8N2K0 398 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 JAGN1Q8N5M9 183 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 FAM86B1Q8N7N1 296 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 ACOT4Q8N9L9 421 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 TTC29Q8NA56 475 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 LRRC75AQ8NAA5 344 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 FBXL13Q8NEE6 735 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR51L1Q8NGJ5 315 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR1S2Q8NGQ3 325 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 NDNFQ8TB73 568 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 LRRC20Q8TCA0 184 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 NPRL2Q8WTW4 380 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 FAM222BQ8WU58 562 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 NAT6Q93015 286 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 ZBED3Q96IU2 234 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 OPALINQ96PE5 141 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 MS4A4EQ96PG1 132 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 ATF6BQ99941 703 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 MRPL45Q9BRJ2 306 aaKnown RBP3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 FAIM2Q9BWQ8 316 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 TMEM59Q9BXS4 323 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC7A5P2Q9GIP4 190 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 TUBB1Q9H4B7 451 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 PANK3Q9H999 370 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 FGF20Q9NP95 211 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 TREM1Q9NP99 234 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 LSM7Q9UK45 103 aaKnown RBP3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 STAP1Q9ULZ2 295 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 PLLPQ9Y342 182 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 MOB4Q9Y3A3 225 aa3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P48-201ENST00000446155 C3P01024 1663 aa3.46□□□□□ -1.85
HMGB1P48-201ENST00000446155 RALGAPA1Q6GYQ0 2036 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 AGLP35573 1532 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 BIVM-ERCC5R4GMW8 1640 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 A0A1B0GTH9 108 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 TMEM120BA0PK00 339 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 RPL37AP8A6NKH3 93 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 A8MXK9 166 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 ZNF99A8MXY4 864 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 ZNF487B1APH4 448 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 ERLIN2O94905 339 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 FGF1P05230 155 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 GATA2P23769 480 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 FOXN2P32314 431 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 RORAP35398 523 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 HMGCLP35914 325 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 GSSP48637 474 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 IST1P53990 364 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 PSMD4P55036 377 aaKnown RBP3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 GPX6P59796 221 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 ERVPABLB-1P60509 514 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 CHRNB3Q05901 458 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 CD300CQ08708 224 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 RCAN2Q14206 197 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 LTB4RQ15722 352 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 SLC22A6Q4U2R8 563 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 TCTEX1D4Q5JR98 221 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 SAMD4BQ5PRF9 694 aaKnown RBP3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 GPR157Q5UAW9 335 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 PDPK2PQ6A1A2 396 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 ULK3Q6PHR2 472 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 COMTD1Q86VU5 262 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 APOBEC3FQ8IUX4 373 aaKnown RBP3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 GPR65Q8IYL9 337 aa3.46□□□□□ -1.86
HMGB1P48-201ENST00000446155 ZNF100Q8IYN0 542 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms