RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 HIF3AQ9Y2N7 669 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 AMDHD2Q9Y303 409 aa15.33■□□□□ 0.04
SMARCAL1-209ENST00000444508 TRBV4-1A0A0J9YWV2 114 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 A0A1W2PR80 420 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 TCRBV5S2A0A599 114 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 CLOCKO15516 846 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 WNT11O96014 354 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 GPR4P46093 362 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 CSNK1A1P48729 337 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 DAP3P51398 398 aaKnown RBP15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 CHRNB3Q05901 458 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 MELKQ14680 651 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 FAM98BQ52LJ0 330 aaKnown RBP15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 ALG10Q5BKT4 473 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 C1QTNF12Q5T7M4 302 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 TMPRSS11FQ6ZWK6 438 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 PIWIL3Q7Z3Z3 882 aaKnown RBP15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 MEX3DQ86XN8 651 aaKnown RBP15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 OR1K1Q8NGR3 316 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 ZNF566Q969W8 418 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 ULBP2Q9BZM5 246 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 NDEL1Q9GZM8 345 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 MAGIXQ9H6Y5 334 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 MAGED1Q9Y5V3 778 aaPredicted RBP15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 SLC25A15Q9Y619 301 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 AKAP6Q13023 2319 aa15.32■□□□□ 0.04
SMARCAL1-209ENST00000444508 PRR14LQ5THK1 2151 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 CSMD1Q96PZ7 3565 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 TRAV27A0A087WT01 109 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 IGHG1P01857 330 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 TSPAN19P0C672 248 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 RRM2P31350 389 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 PRPS1P60891 318 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 ARF1P84077 181 aaKnown RBP15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 LAPTM4AQ15012 233 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 TAF11Q15544 211 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 CEACAM16Q2WEN9 425 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 HIKESHIQ53FT3 197 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 ANKRD16Q6P6B7 361 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 KLHL17Q6TDP4 642 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 OR4K5Q8NGD3 323 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 OR13C2Q8NGS9 318 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 OR51A7Q8NH64 312 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 NRGNQ92686 78 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 SLC25A44Q96H78 314 aaPredicted RBP15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 BOD1Q96IK1 185 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 FAM46AQ96IP4 442 aaKnown RBP15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 HS3ST6Q96QI5 342 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 OBP2BQ9NPH6 170 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 STX18Q9P2W9 335 aaKnown RBP15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 TMCC3Q9ULS5 477 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 AURKCQ9UQB9 309 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 ALPK2Q86TB3 2170 aa15.31■□□□□ 0.04
SMARCAL1-209ENST00000444508 ZNF99A8MXY4 864 aaPredicted RBP15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 ACOT8O14734 319 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 KRT36O76013 467 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 CD3EP07766 207 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 LOXP28300 417 aaPredicted RBP15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 CLRN1P58418 232 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 UBE2NP61088 152 aaKnown RBP15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 RPS4XP62701 263 aaKnown RBP15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 SEC23BQ15437 767 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 ACKR1Q16570 336 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 TBRG1Q3YBR2 411 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 PHYHD1Q5SRE7 291 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 NCMAPQ5T1S8 102 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 PGM2L1Q6PCE3 622 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 SEZ6L2Q6UXD5 910 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 ZNF704Q6ZNC4 412 aaPredicted RBP15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 WDFY1Q8IWB7 410 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 WDR31Q8NA23 367 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 BCL2L2Q92843 193 aaPredicted RBP15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 TMEM54Q969K7 222 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 ALPK1Q96QP1 1244 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 TNFRSF13CQ96RJ3 184 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 PLEKHF2Q9H8W4 249 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 GLTPQ9NZD2 209 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 POFUT2Q9Y2G5 429 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 RNF115Q9Y4L5 304 aa15.3■□□□□ 0.04
SMARCAL1-209ENST00000444508 CCDC168Q8NDH2 2452 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 CREBBPQ92793 2442 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 A0A096LPE4 126 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 A0A1W2PPR1 153 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 A0A1W2PPZ6 126 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 SH3PXD2BA1X283 911 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 NPIPB13A6NJU9 1138 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 AQP12BA6NM10 295 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 NPIPB4C9JG80 1138 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 CDC42EP2O14613 210 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 GSC2O15499 205 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 HOXB1P14653 301 aaPredicted RBP15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 IFNGR2P38484 337 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 MAGEA2P43356 314 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 ZNF83P51522 516 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 BSPH1Q075Z2 132 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 TOP3AQ13472 1001 aaPredicted RBP15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 FLOT2Q14254 428 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 ZBED5Q49AG3 693 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 TMEM108Q6UXF1 575 aa15.29■□□□□ 0.04
SMARCAL1-209ENST00000444508 AQP12AQ8IXF9 295 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms