RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 MYLK2Q9H1R3 596 aa16.4■□□□□ 0.22
ATPAF2-201ENST00000444058 MOKQ9UQ07 419 aa16.4■□□□□ 0.22
ATPAF2-201ENST00000444058 ALPK2Q86TB3 2170 aa16.4■□□□□ 0.22
ATPAF2-201ENST00000444058 H7C417 338 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 KPNA4O00629 521 aaPredicted RBP16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 TNFRSF1BP20333 461 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 IFNA8P32881 189 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 SEC24CP53992 1094 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 NAAAQ02083 359 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 CHRNB3Q05901 458 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 ST3GAL3Q11203 375 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 CAMK2DQ13557 499 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 CARD17Q5XLA6 110 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 SLC35D2Q76EJ3 337 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 SLC46A3Q7Z3Q1 461 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 NKAIN4Q8IVV8 208 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 LRRC17Q8N6Y2 441 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 IL17RDQ8NFM7 739 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 TMEM239Q8WW34 195 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 TPD52L3Q96J77 140 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 CACNG6Q9BXT2 260 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 ULBP2Q9BZM5 246 aa16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 NSRP1Q9H0G5 558 aaKnown RBP16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 DENND2DQ9H6A0 471 aaPredicted RBP16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 HEATR1Q9H583 2144 aaKnown RBP16.39■□□□□ 0.21
ATPAF2-201ENST00000444058 C11orf98E9PRG8 122 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 NME4O00746 187 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 RNF13O43567 381 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 SNX3O60493 162 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 CECR9P0C854 216 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 UMPSP11172 480 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 PRDX6P30041 224 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 CSNK1A1P48729 337 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 SLC7A2P52569 658 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 BIDP55957 195 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 TNK1Q13470 666 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 KRTAP21-3Q3LHN1 58 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 NANOGNBQ7Z5D8 188 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 OR4F15Q8NGB8 312 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 TMEM255BQ8WV15 326 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 TMEM54Q969K7 222 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 SLC25A44Q96H78 314 aaPredicted RBP16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 PRRC1Q96M27 445 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 B3GNT2Q9NY97 397 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 POFUT2Q9Y2G5 429 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 MED31Q9Y3C7 131 aa16.38■□□□□ 0.21
ATPAF2-201ENST00000444058 CENPBD1B2RD01 187 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 CXCR6O00574 342 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 ENTPD5O75356 428 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 SERPINI2O75830 405 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 PDE5AO76074 875 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 LY6G6DO95868 133 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 TSPAN19P0C672 248 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 FUT1P19526 365 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 LSP1P33241 339 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 NUDT2P50583 147 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 UGT2B15P54855 530 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 TUBA1BP68363 451 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 TUBA4AP68366 448 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 SWI5Q1ZZU3 235 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 TUBA1AQ71U36 451 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 PIWIL3Q7Z3Z3 882 aaKnown RBP16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 WDFY1Q8IWB7 410 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 NUP37Q8NFH4 326 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 ZNF566Q969W8 418 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 SGTBQ96EQ0 304 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 FOXB1Q99853 325 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 CA10Q9NS85 328 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 GLTPQ9NZD2 209 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 ABCD2Q9UBJ2 740 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 GDF2Q9UK05 429 aaPredicted RBP16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 A4GNTQ9UNA3 340 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 PMF1-BGLAPU3KQ54 211 aa16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 NIPBLQ6KC79 2804 aaeCLIP16.37■□□□□ 0.21
ATPAF2-201ENST00000444058 NSD1Q96L73 2696 aaPredicted RBP16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 GMNCA6NCL1 334 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 BLOC1S5-TXNDC5H3BN57 136 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 SHOX2O60902 331 aaPredicted RBP16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 NDUFS7O75251 213 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 OR7A10O76100 309 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 BCL10O95999 233 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 IFNW1P05000 195 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 ACVR1BP36896 505 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 GSK3BP49841 420 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 DSCR9P59020 149 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 RAB35Q15286 201 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 ZNF813Q6ZN06 617 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 CBLL1Q75N03 491 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 HDDC2Q7Z4H3 204 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 CPLX4Q7Z7G2 160 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 NANOS1Q8WY41 292 aaKnown RBP16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 POM121Q96HA1 1249 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 SEPHS2Q99611 448 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 C20orf141Q9NUB4 165 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 STX18Q9P2W9 335 aaKnown RBP16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 FBXO9Q9UK97 447 aaPredicted RBP16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 FBXL3Q9UKT7 428 aa16.36■□□□□ 0.21
ATPAF2-201ENST00000444058 A0A1W2PRG6 482 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 ZNF503-AS2A6NEH8 195 aa16.35■□□□□ 0.21
ATPAF2-201ENST00000444058 NPIPB13A6NJU9 1138 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms