RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 MELKQ14680 651 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 STK11Q15831 433 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 GABRA6Q16445 453 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 ACKR1Q16570 336 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 OR7E24Q6IFN5 339 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 ALKBH2Q6NS38 261 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 HMBOX1Q6NT76 420 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 LINGO2Q7L985 606 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 LINC00471Q8N535 108 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 PAPD5Q8NDF8 572 aaKnown RBP10.85□□□□□ -0.67
USP1-203ENST00000442679 OR4C15Q8NGM1 316 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 OR6N1Q8NGY5 312 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 HSD17B8Q92506 261 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 UTP4Q969X6 686 aaKnown RBP10.85□□□□□ -0.67
USP1-203ENST00000442679 C14orf79Q96F83 325 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 LRR1Q96L50 414 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 MUS81Q96NY9 551 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 GPA33Q99795 319 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 YY1AP1Q9H869 796 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 REEP1Q9H902 201 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 GPR35Q9HC97 309 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 B3GAT2Q9NPZ5 323 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 CCM2LQ9NUG4 571 aaPredicted RBP10.85□□□□□ -0.67
USP1-203ENST00000442679 VNN3Q9NY84 501 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 SAMHD1Q9Y3Z3 626 aaKnown RBP10.85□□□□□ -0.67
USP1-203ENST00000442679 UNC79Q9P2D8 2635 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 MPDZO75970 2070 aa10.85□□□□□ -0.67
USP1-203ENST00000442679 A6NNC1 897 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 RPL36A-HNRNPH2H7BZ11 118 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 GNGT2O14610 69 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 KLF4O43474 513 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 FKBP6O75344 327 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 CCNB2O95067 398 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 RPL4P36578 427 aaKnown RBP10.84□□□□□ -0.67
USP1-203ENST00000442679 CSNK1A1P48729 337 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 DAP3P51398 398 aaKnown RBP10.84□□□□□ -0.67
USP1-203ENST00000442679 CTXN1P60606 82 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 CCNIQ14094 377 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 PHYHD1Q5SRE7 291 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 IGFN1Q86VF2 1251 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 P2RY8Q86VZ1 359 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 WFDC8Q8IUA0 241 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 LRRC75AQ8NAA5 344 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 GNPDA2Q8TDQ7 276 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 ASB10Q8WXI3 467 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 ZNF566Q969W8 418 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 SLCO4A1Q96BD0 722 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 MUCL1Q96DR8 90 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 SLC25A44Q96H78 314 aaPredicted RBP10.84□□□□□ -0.67
USP1-203ENST00000442679 ALKBH3Q96Q83 286 aaPredicted RBP10.84□□□□□ -0.67
USP1-203ENST00000442679 NDEL1Q9GZM8 345 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 TXNIPQ9H3M7 391 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 CRLF2Q9HC73 371 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 U3KQV3 271 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 DCHS2Q6V1P9 2916 aa10.84□□□□□ -0.67
USP1-203ENST00000442679 NPIPB13A6NJU9 1138 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 OR5H1A6NKK0 313 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 NPIPB4C9JG80 1138 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 CTAG2O75638 210 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 NDUFB2O95178 105 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 IGHG1P01857 330 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 ACADSP16219 412 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 ZNF26P17031 533 aaPredicted RBP10.83□□□□□ -0.68
USP1-203ENST00000442679 CRYGSP22914 178 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 FPR3P25089 353 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 RPL27P61353 136 aaKnown RBP10.83□□□□□ -0.68
USP1-203ENST00000442679 ERVK-25P63136 954 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 ARF1P84077 181 aaKnown RBP10.83□□□□□ -0.68
USP1-203ENST00000442679 RUNX1T1Q06455 604 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 TOP3AQ13472 1001 aaPredicted RBP10.83□□□□□ -0.68
USP1-203ENST00000442679 TAF11Q15544 211 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 TAB1Q15750 504 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 MICAQ29983 383 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 CEACAM16Q2WEN9 425 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 TIMM23BQ5SRD1 257 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 ARMC4Q5T2S8 1044 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 C1orf94Q6P1W5 598 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 PGBD2Q6P3X8 592 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 HDDC2Q7Z4H3 204 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 C1orf162Q8NEQ5 155 aaPredicted RBP10.83□□□□□ -0.68
USP1-203ENST00000442679 OR9Q2Q8NGE9 314 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 TMEM54Q969K7 222 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 ZNF837Q96EG3 531 aaPredicted RBP10.83□□□□□ -0.68
USP1-203ENST00000442679 GLTPQ9NZD2 209 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 ZNF346Q9UL40 294 aaKnown RBP10.83□□□□□ -0.68
USP1-203ENST00000442679 SIGLEC7Q9Y286 467 aa10.83□□□□□ -0.68
USP1-203ENST00000442679 FAM221AA4D161 298 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 TRMUO75648 421 aaKnown RBP10.82□□□□□ -0.68
USP1-203ENST00000442679 TIPRLO75663 272 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 GASTP01350 101 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 IGHMP01871 453 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 CD14P08571 375 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 PGA4P0DJD7 388 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 PGA3P0DJD8 388 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 ACVR1BP36896 505 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 GSSP48637 474 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 SH3BGRP55822 239 aaPredicted RBP10.82□□□□□ -0.68
USP1-203ENST00000442679 CLRN1P58418 232 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 TSPAN31Q12999 210 aa10.82□□□□□ -0.68
USP1-203ENST00000442679 GK3PQ14409 553 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms