RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 HIST2H2BDQ6DRA6 164 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PNCKQ6P2M8 343 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ZNF782Q6ZMW2 699 aaPredicted RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ZNF571Q7Z3V5 609 aaPredicted RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 COMMD7Q86VX2 200 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PHF13Q86YI8 300 aaPredicted RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 STX19Q8N4C7 294 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR4N2Q8NGD1 307 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR10Q1Q8NGQ4 319 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 MRAPQ8TCY5 172 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CDS1Q92903 461 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PPWD1Q96BP3 646 aaKnown RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 FAM210BQ96KR6 192 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PRAP1Q96NZ9 151 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 DDOQ99489 341 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PCGF1Q9BSM1 259 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 TMED9Q9BVK6 235 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 MAP1LC3CQ9BXW4 147 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 BEX2Q9BXY8 128 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CSTL1Q9H114 145 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR51M1Q9H341 326 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PIGMQ9H3S5 423 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 IL1RAPQ9NPH3 570 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RGS18Q9NS28 235 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PLEKHJ1Q9NW61 149 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PIPOXQ9P0Z9 390 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ADGRA2Q96PE1 1338 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 KRTAP9-6A0A140TA67 174 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 MANSC4A6NHS7 340 aaPredicted RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 E9PAM4 449 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 NEDD8-MDP1E9PL57 170 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 M0R3G1 203 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PCDH7O60245 1069 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 VAPBO95292 243 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SMIM6P0DI80 62 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 BMP7P18075 431 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 TSPAN8P19075 237 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 FPR3P25089 353 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CALCRP30988 508 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 GPX4P36969 197 aaPredicted RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 QARSP47897 775 aaKnown RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CCL11P51671 97 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 AQP5P55064 265 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 FOXL1Q12952 345 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RAB31Q13636 194 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PTGR1Q14914 329 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 DUSP6Q16828 381 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SLC36A2Q495M3 483 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 HSD17B12Q53GQ0 312 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ADAM5Q6NVV9 412 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 UQCC3Q6UW78 93 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 TREML4Q6UXN2 200 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SIGLEC15Q6ZMC9 328 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RAB43Q86YS6 212 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 LRRC75AQ8NAA5 344 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR7G2Q8NG99 324 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SPRYD4Q8WW59 207 aaPredicted RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SLC7A6Q92536 515 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PINX1Q96BK5 328 aaKnown RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SIGLEC10Q96LC7 697 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 AMDHD1Q96NU7 426 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SLC38A2Q96QD8 506 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ACOX2Q99424 681 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CPNE1Q99829 537 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SLC35A5Q9BS91 424 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 MCRIP2Q9BUT9 160 aaKnown RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 DUSP16Q9BY84 665 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SHARPINQ9H0F6 387 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PORCNQ9H237 461 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 DSN1Q9H410 356 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SEC61A2Q9H9S3 476 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RHOFQ9HBH0 211 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SIX2Q9NPC8 291 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 DMAC2Q9NW81 257 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PAK5Q9P286 719 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 WRAP73Q9P2S5 460 aaPredicted RBP5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PDE10AQ9Y233 779 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 YIPF1Q9Y548 306 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 COL4A5P29400 1685 aa5.3□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 NFASCO94856 1347 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 A0A087X0K7 114 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PRSS37A4D1T9 235 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CCDC182A6NF36 153 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 A6NNC1 897 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ADAM10O14672 748 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RAMP3O60896 148 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR2B3O76000 313 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ACTL6AO96019 429 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 C1QBP02746 253 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 FBP1P09467 338 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 HOXC6P09630 235 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 NBEAP1P0C6P0 100 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ENGP17813 658 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RGRP47804 291 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 IDH2P48735 452 aaKnown RBP5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ACLYP53396 1101 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ZP1P60852 638 aa5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 POLR2LP62875 67 aaKnown RBP5.29□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 HHEXQ03014 270 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms