RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 NRROSQ86YC3 692 aa18.52■□□□□ 0.55
SHOX2-203ENST00000441443 OR14A16Q8NHC5 309 aa18.52■□□□□ 0.55
SHOX2-203ENST00000441443 SEC22AQ96IW7 307 aa18.52■□□□□ 0.55
SHOX2-203ENST00000441443 BIN3Q9NQY0 253 aa18.52■□□□□ 0.55
SHOX2-203ENST00000441443 FBXO4Q9UKT5 387 aa18.52■□□□□ 0.55
SHOX2-203ENST00000441443 CA3P07451 260 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 THBS1P07996 1170 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 SPP1P10451 314 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 ETFBKMTQ8IXQ9 262 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 ZNF619Q8N2I2 560 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 SVBPQ8N300 66 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 LRRC25Q8N386 305 aaPredicted RBP18.51■□□□□ 0.55
SHOX2-203ENST00000441443 CAMKVQ8NCB2 501 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 PHYHIPQ92561 330 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 SLITRK2Q9H156 845 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 TRAV18A0A075B6X5 111 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 OR5H14A6NHG9 310 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 CCSO14618 274 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 OR8G3PP0DMU2 310 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 PLAURQ03405 335 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 CCDC157Q569K6 752 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 DCST2Q5T1A1 773 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 SHISA5Q8N114 240 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 INSM2Q96T92 566 aaPredicted RBP18.51■□□□□ 0.55
SHOX2-203ENST00000441443 FLRT3Q9NZU0 649 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 CHRNA9Q9UGM1 479 aa18.51■□□□□ 0.55
SHOX2-203ENST00000441443 TRAV8-7A0A075B6U6 113 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 XRCC3O43542 346 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 CSF1P09603 554 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 C12orf45Q8N5I9 185 aaPredicted RBP18.5■□□□□ 0.55
SHOX2-203ENST00000441443 STEAP2Q8NFT2 490 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 C10orf90Q96M02 699 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 PIGMQ9H3S5 423 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 A0A0D9SG52 128 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 C4orf47A7E2U8 309 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 LINC00587B1AMM8 73 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 DBIP07108 87 aaKnown RBP18.5■□□□□ 0.55
SHOX2-203ENST00000441443 ANXA2P07355 339 aaKnown RBP18.5■□□□□ 0.55
SHOX2-203ENST00000441443 RPL4P36578 427 aaKnown RBP18.5■□□□□ 0.55
SHOX2-203ENST00000441443 S100A12P80511 92 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 CEBPEQ15744 281 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 OR51D1Q8NGF3 324 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 GAL3ST1Q99999 423 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 FAM117AQ9C073 453 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 ZNF350Q9GZX5 532 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 TMEM27Q9HBJ8 222 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 CACNA1CQ13936 2221 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 TRIOO75962 3097 aa18.5■□□□□ 0.55
SHOX2-203ENST00000441443 GXYLT2A0PJZ3 443 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 KCNAB3O43448 404 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 ADAM11O75078 769 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 AKR7A3O95154 331 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 OR4E1P0C645 316 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 AKAIN1P0CW23 69 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 LIPCP11150 499 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 DIO1P49895 249 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 SNTB1Q13884 538 aaKnown RBP18.49■□□□□ 0.55
SHOX2-203ENST00000441443 MTSS1LQ765P7 747 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 C7orf61Q8IZ16 206 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 RNF166Q96A37 237 aaPredicted RBP18.49■□□□□ 0.55
SHOX2-203ENST00000441443 TMEM106CQ9BVX2 250 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 BRWD1Q9NSI6 2320 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 A0A1B0GWA3 101 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 DNAJB6O75190 326 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 SRSF3P84103 164 aaKnown RBP18.49■□□□□ 0.55
SHOX2-203ENST00000441443 DNM1P46Q6ZS02 220 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 ZAR1Q86SH2 424 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 SLC35F3Q8IY50 421 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 CCDC36Q8IYA8 594 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 KCNRGQ8N5I3 272 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 PTDSS2Q9BVG9 487 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 SERTAD3Q9UJW9 196 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 EDARQ9UNE0 448 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 RNGTTO60942 597 aaKnown RBP18.49■□□□□ 0.55
SHOX2-203ENST00000441443 AGR2O95994 175 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 CD1AP06126 327 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 FBXO45P0C2W1 286 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 RFC3P40938 356 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 DPTQ07507 201 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 TANGO2Q6ICL3 276 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 UNQ6126/PRO20091Q6UXV3 157 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 NDUFAF7Q7L592 441 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 BIVMQ86UB2 503 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 ZNF511Q8NB15 262 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 THAP6Q8TBB0 222 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 C15orf40Q8WUR7 153 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 PDCD10Q9BUL8 212 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 KCNK6Q9Y257 313 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 SLC27A6Q9Y2P4 619 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 ETV7Q9Y603 341 aa18.49■□□□□ 0.55
SHOX2-203ENST00000441443 GGT3PA6NGU5 568 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 OR52A4PA6NMU1 304 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 AGTR1P30556 359 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 Q499Y3 187 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 PAN3Q58A45 887 aaKnown RBP18.48■□□□□ 0.55
SHOX2-203ENST00000441443 RAB12Q6IQ22 244 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 COX18Q8N8Q8 333 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 OR10AC1Q8NH08 325 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 NANPQ8TBE9 248 aa18.48■□□□□ 0.55
SHOX2-203ENST00000441443 RASD2Q96D21 266 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms