RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SLC25A27O95847 323 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 UQCRBP14927 111 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 RARRES1P49788 294 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 TNFSF10P50591 281 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 PKIAP61925 76 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 ID3Q02535 119 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 LAPTM4AQ15012 233 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 LPCAT4Q643R3 524 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 RNF165Q6ZSG1 346 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 Q7L0L9 218 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 ATG4DQ86TL0 474 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-206ENST00000441438 EMC1Q8N766 993 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 OR1K1Q8NGR3 316 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 ZBTB8AQ96BR9 441 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 DDIT4Q9NX09 232 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 ARL15Q9NXU5 204 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 CDH10Q9Y6N8 788 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 FAM90A10PA6NDY2 464 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 JUNP05412 331 aaKnown RBP9.54□□□□□ -0.88
SYNE2-206ENST00000441438 BMP5P22003 454 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 CCL11P51671 97 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 CLDN18P56856 261 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 IL13RA1P78552 427 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 CD47Q08722 323 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 MLLT11Q13015 90 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-206ENST00000441438 TPRG1LQ5T0D9 272 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 CCDC144NLQ6NUI1 221 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 AMIGO1Q86WK6 493 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 STPG2Q8N412 459 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 C12orf45Q8N5I9 185 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-206ENST00000441438 AQP11Q8NBQ7 271 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 DMBX1Q8NFW5 382 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 SPSB2Q99619 263 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 HDHD5Q9BXW7 423 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 MANSC1Q9H8J5 431 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 POLE4Q9NR33 117 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 STYXL1Q9Y6J8 313 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 PPIAL4EA0A075B759 164 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 ANTXRLA6NF34 631 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 AP2A2O94973 939 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 PTTG1O95997 202 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 PPIAL4FP0DN26 164 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 BRCC3P46736 316 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 WNT3AP56704 352 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 ERVPABLB-1P60509 514 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 MVKQ03426 396 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 FASTKQ14296 549 aaKnown RBP9.54□□□□□ -0.88
SYNE2-206ENST00000441438 DGUOKQ16854 277 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 CARD16Q5EG05 197 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 LIPKQ5VXJ0 399 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 NUFIP2Q7Z417 695 aaKnown RBP9.54□□□□□ -0.88
SYNE2-206ENST00000441438 UNC93AQ86WB7 457 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 ZNF557Q8N988 423 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-206ENST00000441438 OR56A1Q8NGH5 318 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 FN3KQ9H479 309 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 ANGPT4Q9Y264 503 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 PPIAL4AQ9Y536 164 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 PEX16Q9Y5Y5 336 aa9.54□□□□□ -0.88
SYNE2-206ENST00000441438 GJE1A6NN92 205 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 NPIPA5E9PKD4 350 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 NPIPA3F8WFD2 350 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 TOX4O94842 621 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 PRAMEF1O95521 474 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 C1QBP02746 253 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 HAPLN1P10915 354 aaPredicted RBP9.53□□□□□ -0.88
SYNE2-206ENST00000441438 RAB6AP20340 208 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 RRADP55042 308 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 RAB2AP61019 212 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 NKG7Q16617 165 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 CDKN3Q16667 212 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 SNX29P2Q8IUI4 249 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 C4orf19Q8IY42 314 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 LGI3Q8N145 548 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 OR52N4Q8NGI2 321 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 MZB1Q8WU39 189 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 RERGQ96A58 199 aaPredicted RBP9.53□□□□□ -0.88
SYNE2-206ENST00000441438 NSUN5Q96P11 429 aaKnown RBP9.53□□□□□ -0.88
SYNE2-206ENST00000441438 OR8B4Q96RC9 309 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 ACOX2Q99424 681 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 IL1RL2Q9HB29 575 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 IL17BQ9UHF5 180 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 NPIPA1Q9UND3 350 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 Q9Y3F1 56 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 KAT6AQ92794 2004 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 ZNF23P17027 643 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 LGALS7P47929 136 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 SOX2P48431 317 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 BACE1P56817 501 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 EMX2Q04743 252 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 CDNFQ49AH0 187 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 FNBP1LQ5T0N5 605 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 SAMD13Q5VXD3 122 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 OR9Q2Q8NGE9 314 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 KREMEN1Q96MU8 473 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 SLC39A8Q9C0K1 460 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 TLNRD1Q9H1K6 362 aa9.53□□□□□ -0.88
SYNE2-206ENST00000441438 TBC1D3BA6NDS4 549 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 CENPXA8MT69 81 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 C5orf58C9J3I9 102 aa9.52□□□□□ -0.88
SYNE2-206ENST00000441438 QARSP47897 775 aaKnown RBP9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms