RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 OR13C2Q8NGS9 318 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 OR14A16Q8NHC5 309 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 SNX33Q8WV41 574 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 SLC35A4Q96G79 324 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 MS4A4EQ96PG1 132 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 PDCD10Q9BUL8 212 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 WDR13Q9H1Z4 485 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 TMEM185BQ9H7F4 350 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 APMAPQ9HDC9 416 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 ICAM5Q9UMF0 924 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 EDARQ9UNE0 448 aa10.87□□□□□ -0.67
LTBR-203ENST00000441074 A0A1W2PR48 441 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 SHISA7A6NL88 538 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 BCL2L11O43521 198 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 LCMT2O60294 686 aaKnown RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 RAD1O60671 282 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 LYPD3O95274 346 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 CD8AP01732 235 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 HIST1H1TP22492 207 aaPredicted RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 MC3RP41968 323 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 TSFMP43897 325 aaKnown RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 LUMP51884 338 aaPredicted RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 AVPI1Q5T686 147 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 Q6ZS52 159 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 ARL14Q8N4G2 192 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 POMGNT2Q8NAT1 580 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 BPIFA2Q96DR5 249 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 C1orf198Q9H425 327 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 MBD2Q9UBB5 411 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 GNG8Q9UK08 70 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 OR14I1A6ND48 311 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 ACOD1A6NK06 481 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 DUXAA6NLW8 204 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 GPR89AB7ZAQ6 455 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 EIF3GO75821 320 aaKnown RBP eCLIP10.86□□□□□ -0.67
LTBR-203ENST00000441074 AGR2O95994 175 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 IFNGP01579 166 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 FABP1P07148 127 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 GPR89BP0CG08 455 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 C8orf89P0DMQ9 161 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 SPP1P10451 314 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 C5AR1P21730 350 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 ITPKBP27987 946 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 MPIP34949 423 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 KCNJ3P48549 501 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 SNTB1Q13884 538 aaKnown RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 CEBPEQ15744 281 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 C4orf46Q504U0 113 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 EIPR1Q53HC9 387 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 LY6G6FQ5SQ64 297 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 GLT8D1Q68CQ7 371 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 SLC48A1Q6P1K1 146 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 SLC35F2Q8IXU6 374 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 DND1Q8IYX4 353 aaKnown RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 OR1S2Q8NGQ3 325 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 RPS4Y2Q8TD47 263 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 ADAMTS15Q8TE58 950 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 RAB7BQ96AH8 199 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 ZMYND19Q96E35 227 aaPredicted RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 NECAB3Q96P71 396 aaPredicted RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 CNN2Q99439 309 aaKnown RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 CMSS1Q9BQ75 279 aaKnown RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 AICDAQ9GZX7 198 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 MYEF2Q9P2K5 600 aaKnown RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 CES1P1Q9UKY3 287 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 PCDHB10Q9UN67 800 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 CARHSP1Q9Y2V2 147 aaKnown RBP10.86□□□□□ -0.67
LTBR-203ENST00000441074 ZNF281Q9Y2X9 895 aa10.86□□□□□ -0.67
LTBR-203ENST00000441074 TTC28Q96AY4 2481 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 OR6C68A6NDL8 312 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 POM121BA6NF01 834 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 SULT1C2O00338 296 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 YKT6O15498 198 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 XRCC3O43542 346 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 PPP1R3DO95685 299 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 AIFM1O95831 613 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 ACAA1P09110 424 aaPredicted RBP10.85□□□□□ -0.67
LTBR-203ENST00000441074 SLC25A4P12235 298 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 F3P13726 295 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 ADCYAP1P18509 176 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 RAB28P51157 221 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 ADPRHP54922 357 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 EEF1A1P68104 462 aaKnown RBP10.85□□□□□ -0.67
LTBR-203ENST00000441074 OR1Q1Q15612 314 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 ZNF776Q68DI1 518 aaPredicted RBP10.85□□□□□ -0.67
LTBR-203ENST00000441074 ZNF600Q6ZNG1 722 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 BEST3Q8N1M1 668 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 LINC01555Q8NAE3 123 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 OR6S1Q8NH40 331 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 THAP6Q8TBB0 222 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 EDAQ92838 391 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 MS4A6EQ96DS6 147 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 MRPL48Q96GC5 212 aaKnown RBP10.85□□□□□ -0.67
LTBR-203ENST00000441074 ZFP57Q9NU63 452 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 C14orf105Q9NVL8 296 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 NCDNQ9UBB6 729 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 ZNF629Q9UEG4 869 aaPredicted RBP10.85□□□□□ -0.67
LTBR-203ENST00000441074 TNFSF18Q9UNG2 199 aa10.85□□□□□ -0.67
LTBR-203ENST00000441074 ATG4BQ9Y4P1 393 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms