RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 NPDC1Q9NQX5 325 aaPredicted RBP8.29□□□□□ -1.08
COPB1-202ENST00000439561 C2orf42Q9NWW7 574 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 GRHPRQ9UBQ7 328 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 SHPKQ9UHJ6 478 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 AUP1Q9Y679 476 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 HEATR5BQ9P2D3 2071 aa8.29□□□□□ -1.08
COPB1-202ENST00000439561 SGCEO43556 437 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 GPANK1O95872 356 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 NAT2P11245 290 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 EMDP50402 254 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 CAPZA1P52907 286 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 CXADRP78310 365 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 EIF2B1Q14232 305 aaKnown RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 H3F3CQ6NXT2 135 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 LRRC69Q6ZNQ3 347 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 HSD17B13Q7Z5P4 300 aaPredicted RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 BPIFB2Q8N4F0 458 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 OR4N2Q8NGD1 307 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 OR10AC1Q8NH08 325 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 WFIKKN2Q8TEU8 576 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 MIB2Q96AX9 1013 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 ZBTB8AQ96BR9 441 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 ALPK3Q96L96 1907 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 LINC00615Q96LM1 132 aaPredicted RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 TIMP4Q99727 224 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 RNF208Q9H0X6 261 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 SLC6A17Q9H1V8 727 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 MOKQ9UQ07 419 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 OR6C68A6NDL8 312 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 ZNF736B4DX44 427 aaPredicted RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 EIF1AYO14602 144 aaKnown RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 XKRYO14609 159 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 CD2P06729 351 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 CPN1P15169 458 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 CTNNB1P35222 781 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 LSSP48449 732 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 PRMT2P55345 433 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 SMCO1Q147U7 214 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 IRF4Q15306 451 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 ELFN2Q5R3F8 820 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 LRRTM1Q86UE6 522 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 DND1Q8IYX4 353 aaKnown RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 SYS1Q8N2H4 156 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 METTL27Q8N6F8 245 aaPredicted RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 ACBD4Q8NC06 268 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 OR1J2Q8NGS2 313 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 OR10Z1Q8NGY1 313 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 PHOSPHO1Q8TCT1 267 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 GPR148Q8TDV2 347 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 DCUN1D4Q92564 292 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 GAL3ST3Q96A11 431 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 VOPP1Q96AW1 172 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 GSKIPQ9P0R6 139 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 CGGBP1Q9UFW8 167 aaPredicted RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 PCDHB10Q9UN67 800 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 TSPAN11A1L157 253 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 G3V3Q6 166 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 KLF4O43474 513 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 SULT1B1O43704 296 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 FGF17O60258 216 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 IL5P05113 134 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 OR4E1P0C645 316 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 CEBPBP17676 345 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 DIO1P49895 249 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 EFNB2P52799 333 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 EEF1A1P68104 462 aaKnown RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 ILF3Q12906 894 aaKnown RBP eCLIP8.28□□□□□ -1.08
COPB1-202ENST00000439561 SRSF5Q13243 272 aaKnown RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 ALKBH1Q13686 389 aaKnown RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 SNTB1Q13884 538 aaKnown RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 RBM39Q14498 530 aaKnown RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 C3orf33Q6P1S2 294 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 TFAP2EQ6VUC0 442 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 TMPRSS11FQ6ZWK6 438 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 RAB11FIP2Q7L804 512 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 PRSS41Q7RTY9 318 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 ZNF584Q8IVC4 421 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 CMIPQ8IY22 773 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 OR51A4Q8NGJ6 313 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 OR1S2Q8NGQ3 325 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 OR2L8Q8NGY9 312 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 STOML3Q8TAV4 291 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 STK35Q8TDR2 534 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 UQCC2Q9BRT2 126 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 TINAGL1Q9GZM7 467 aaPredicted RBP8.28□□□□□ -1.08
COPB1-202ENST00000439561 SYT4Q9H2B2 425 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 SCPEP1Q9HB40 452 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 CYB5R1Q9UHQ9 305 aa8.28□□□□□ -1.08
COPB1-202ENST00000439561 TRAV8-7A0A075B6U6 113 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 OR2W5A6NFC9 320 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 GGT3PA6NGU5 568 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 A8MXK9 166 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 OGG1O15527 345 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 GALR3O60755 368 aaPredicted RBP8.27□□□□□ -1.09
COPB1-202ENST00000439561 FGF2P09038 288 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 CNR1P21554 472 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 DPP4P27487 766 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ACTBP60709 375 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 ACTG1P63261 375 aa8.27□□□□□ -1.09
COPB1-202ENST00000439561 IL13RA1P78552 427 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms