RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ULBP2Q9BZM5 246 aa21.61■■□□□ 1.05
RAPGEF1-206ENST00000438647 ALPK2Q86TB3 2170 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 SOD3P08294 240 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 NCK1P16333 377 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 SPOCK1Q08629 439 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 TRAM2Q15035 370 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 PGGHGQ32M88 737 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 C3orf36Q3SXR2 165 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 GKAP1Q5VSY0 366 aaPredicted RBP21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 GLYATQ6IB77 296 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 CYP4Z1Q86W10 505 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 KRTAP1-3Q8IUG1 177 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 FAM169BQ8N8A8 192 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 GTPBP3Q969Y2 492 aaKnown RBP21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 CCT8L2Q96SF2 557 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 KCNS3Q9BQ31 491 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 NELFAQ9H3P2 528 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 C20orf141Q9NUB4 165 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 EGFL7Q9UHF1 273 aa21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 SAMD4AQ9UPU9 718 aaKnown RBP21.6■■□□□ 1.05
RAPGEF1-206ENST00000438647 A0A1W2PRG6 482 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 YAP1P46937 504 aaKnown RBP21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 MNAT1P51948 309 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 SAMD4BQ5PRF9 694 aaKnown RBP21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 PHYHD1Q5SRE7 291 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 AGAP6Q5VW22 663 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 HDDC2Q7Z4H3 204 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 ZNF566Q969W8 418 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 ZNF837Q96EG3 531 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 TRMT61AQ96FX7 289 aaKnown RBP21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 SLC25A44Q96H78 314 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 SLC38A2Q96QD8 506 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 DHRS9Q9BPW9 319 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 GRIP2Q9C0E4 1043 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 ARL8BQ9NVJ2 186 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 POFUT2Q9Y2G5 429 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 SNX13Q9Y5W8 968 aa21.59■■□□□ 1.05
RAPGEF1-206ENST00000438647 FAM107AO95990 144 aa21.58■■□□□ 1.05
RAPGEF1-206ENST00000438647 BCL10O95999 233 aa21.58■■□□□ 1.05
RAPGEF1-206ENST00000438647 RPL18Q07020 188 aaKnown RBP21.58■■□□□ 1.05
RAPGEF1-206ENST00000438647 C16orf89Q6UX73 402 aa21.58■■□□□ 1.05
RAPGEF1-206ENST00000438647 YTHDF3Q7Z739 585 aaKnown RBP21.58■■□□□ 1.05
RAPGEF1-206ENST00000438647 DTX2Q86UW9 622 aa21.58■■□□□ 1.05
RAPGEF1-206ENST00000438647 RNF148Q8N7C7 305 aa21.58■■□□□ 1.05
RAPGEF1-206ENST00000438647 CRNNQ9UBG3 495 aaPredicted RBP21.58■■□□□ 1.05
RAPGEF1-206ENST00000438647 USF3Q68DE3 2245 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 PLCE1Q9P212 2302 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 IGHV1-18A0A0C4DH31 117 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 MCIDASD6RGH6 385 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 E7EQL1 145 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 J3KTA2 159 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 OVOL3O00110 214 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 HSD17B1P14061 328 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 FOSL1P15407 271 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 DAP3P51398 398 aaKnown RBP21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 ATP5J2P56134 94 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 MXRA7P84157 204 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 ZNF544Q6NX49 715 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 ZNF627Q7L945 461 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 RNF113BQ8IZP6 322 aaKnown RBP21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 BPIFA2Q96DR5 249 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 TRAF4Q9BUZ4 470 aaPredicted RBP21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 KATNB1Q9BVA0 655 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 HEATR1Q9H583 2144 aaKnown RBP21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 GORASP2Q9H8Y8 452 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 DCAF13Q9NV06 445 aaKnown RBP21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 GLTPQ9NZD2 209 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 STX18Q9P2W9 335 aaKnown RBP21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 RHCGQ9UBD6 479 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 MAGEL2Q9UJ55 1249 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 ATP23Q9Y6H3 246 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 ENPP4Q9Y6X5 453 aa21.57■■□□□ 1.04
RAPGEF1-206ENST00000438647 FFAR1O14842 300 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 ENTPD5O75356 428 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 IGKV3-15P01624 115 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 IGHG1P01857 330 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 CRYAAP02489 173 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 IFI30P13284 250 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 CBR1P16152 277 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 TTKP33981 857 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 CAPZA2P47755 286 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 TUBA1BP68363 451 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 TUBA4AP68366 448 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 MELKQ14680 651 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 KRT72Q14CN4 511 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 SPATS1Q496A3 300 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 ZNF813Q6ZN06 617 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 TUBA1AQ71U36 451 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 FBXL14Q8N1E6 418 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 ACOT11Q8WXI4 607 aaPredicted RBP21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 TMEM54Q969K7 222 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 FOXB1Q99853 325 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 ANKRD19PQ9H560 264 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 INIPQ9NRY2 104 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 MAN2C1Q9NTJ4 1040 aa21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 FAM32AQ9Y421 112 aaKnown RBP21.56■■□□□ 1.04
RAPGEF1-206ENST00000438647 CENPBD1B2RD01 187 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 PIP5K1CO60331 668 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 SEC14L2O76054 403 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 IGLV1-44P01699 117 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms