RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 SYT4Q9H2B2 425 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 AKIRIN1Q9H9L7 192 aaPredicted RBP8.6□□□□□ -1.03
CUX1-206ENST00000437600 UCK1Q9HA47 277 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 NPAP1Q9NZP6 1156 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 EPHA6Q9UF33 1036 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ST6GALNAC2Q9UJ37 374 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 POLHQ9Y253 713 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 A0A1W2PQ72 361 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 LNP1A1A4G5 178 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 H3BMH7 237 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 TSC22D2O75157 780 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 AK1P00568 194 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 PRKAR1AP10644 381 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 TALDO1P37837 337 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 GRK6P43250 576 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 RPS15P62841 145 aaKnown RBP8.6□□□□□ -1.03
CUX1-206ENST00000437600 CCL7P80098 99 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ACSM1Q08AH1 577 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 SQSTM1Q13501 440 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ZNF141Q15928 474 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ZNF600Q6ZNG1 722 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 OR6V1Q8N148 313 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ANGPTL6Q8NI99 470 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 OMA1Q96E52 524 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 ZC3H10Q96K80 434 aaKnown RBP8.6□□□□□ -1.03
CUX1-206ENST00000437600 ADAD1Q96M93 576 aaKnown RBP8.6□□□□□ -1.03
CUX1-206ENST00000437600 OR6C1Q96RD1 312 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 CNN2Q99439 309 aaKnown RBP8.6□□□□□ -1.03
CUX1-206ENST00000437600 AUNIPQ9H7T9 357 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 NUDT15Q9NV35 164 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 NCDNQ9UBB6 729 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 IKZF2Q9UKS7 526 aa8.6□□□□□ -1.03
CUX1-206ENST00000437600 A0A1B0GTQ1 180 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 HMX3A6NHT5 357 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 INMT-MINDY4F8WBC2 141 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 H0YC42 278 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 SCDO00767 359 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 HLA-DQA2P01906 255 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 FBLP22087 321 aaKnown RBP8.59□□□□□ -1.03
CUX1-206ENST00000437600 GIFP27352 417 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 OR3A3P47888 321 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 PITPNBP48739 271 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 MTNR1BP49286 362 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 HSD17B7P56937 341 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 PLA2G7Q13093 441 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 TMEM44Q2T9K0 475 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 ALG10Q5BKT4 473 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 ARHGAP11AQ6P4F7 1023 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 SLC51BQ86UW2 128 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 TIGD4Q8IY51 512 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 SLC2A12Q8TD20 617 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 AMELYQ99218 206 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 AIFM2Q9BRQ8 373 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 C12orf10Q9HB07 376 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 NRIP3Q9NQ35 241 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 UBQLN4Q9NRR5 601 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 CYSLTR2Q9NS75 346 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 MYEF2Q9P2K5 600 aaKnown RBP8.59□□□□□ -1.03
CUX1-206ENST00000437600 SERTAD3Q9UJW9 196 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 ARID1AO14497 2285 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 MGAQ8IWI9 3026 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 SHISA8B8ZZ34 492 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 H3BUI4 141 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 MT-ND4P03905 459 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 MAS1P04201 325 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 IL32P24001 234 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 RPL18Q07020 188 aaKnown RBP8.59□□□□□ -1.03
CUX1-206ENST00000437600 C19orf57Q0VDD7 668 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 SNTA1Q13424 505 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 MEP1BQ16820 701 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 PHF19Q5T6S3 580 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 TRILQ7L0X0 811 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 MDGA2Q7Z553 956 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 NOXA1Q86UR1 476 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 PM20D2Q8IYS1 436 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 D2HGDHQ8N465 521 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 FAM109AQ8N4B1 249 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 DUSP19Q8WTR2 217 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 ZNF501Q96CX3 271 aaPredicted RBP8.59□□□□□ -1.03
CUX1-206ENST00000437600 SCPEP1Q9HB40 452 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 FLVCR2Q9UPI3 526 aa8.59□□□□□ -1.03
CUX1-206ENST00000437600 H0YIG0 161 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 ZNF264O43296 627 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 ZNF354AO60765 605 aaPredicted RBP8.59□□□□□ -1.04
CUX1-206ENST00000437600 YES1P07947 543 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 EPXP11678 715 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 SRMP19623 302 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 DIO1P49895 249 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 GBX2P52951 348 aaPredicted RBP8.59□□□□□ -1.04
CUX1-206ENST00000437600 EPHA4P54764 986 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 NRG3P56975 720 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 ZNF117Q03924 483 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 CDK5R1Q15078 307 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 YIF1BQ5BJH7 314 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 LIPNQ5VXI9 398 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 FAM205BPQ63HN1 556 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 BICRALQ6AI39 1079 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 FCRLAQ7L513 359 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 OR6N2Q8NGY6 317 aa8.59□□□□□ -1.04
CUX1-206ENST00000437600 SNAPC3Q92966 411 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms