RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RPS15P62841 145 aaKnown RBP9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 MRPS21P82921 87 aaKnown RBP9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 FLI1Q01543 452 aaPredicted RBP9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 CLLU1Q5K131 121 aa9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 LEG1Q6P5S2 330 aa9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF704Q6ZNC4 412 aaPredicted RBP9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF433Q8N7K0 673 aaPredicted RBP9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 OR2T35Q8NGX2 323 aa9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF671Q8TAW3 534 aa9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 RELTQ969Z4 430 aa9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 DGAT2Q96PD7 388 aa9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 LRRC61Q9BV99 259 aa9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 ZFP64Q9NPA5 681 aa9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 FBXL2Q9UKC9 423 aa9.49□□□□□ -0.89
CLSTN1-203ENST00000435891 C10orf142B7Z368 130 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 PRAMEF26H0Y7S4 382 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 PDCD5O14737 125 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 F13BP05160 661 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 TPOP07202 933 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 SRMP19623 302 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 RPS4XP62701 263 aaKnown RBP9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ACTA2P62736 377 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ACTG2P63267 376 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ARMC6Q6NXE6 501 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 RPL22L1Q6P5R6 122 aaKnown RBP9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ALKAL2Q6UX46 152 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 DPY19L2P2Q6ZN68 376 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF615Q8N8J6 731 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 POMGNT2Q8NAT1 580 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 C2CD4CQ8TF44 421 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 MMABQ96EY8 250 aaPredicted RBP9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 KLHL15Q96M94 604 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF285Q96NJ3 590 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 NPAS1Q99742 590 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 DPAGT1Q9H3H5 408 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 TRABD2BA6NFA1 517 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 TO15178 435 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 SULT1B1O43704 296 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 GPR143P51810 404 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 EGR4Q05215 589 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 LTBQ06643 244 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 GPR139Q6DWJ6 353 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 FAM199XQ6PEV8 388 aaPredicted RBP9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 DEFB119Q8N690 84 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 SLC25A38Q96DW6 304 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 RTN4RQ9BZR6 473 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 FLVCR2Q9UPI3 526 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 TMEM72A0PK05 275 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 PRAMEF2O60811 474 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ARL6IP5O75915 188 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ATG12O94817 140 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 GPANK1O95872 356 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ECDO95905 644 aaPredicted RBP9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 IFI6P09912 130 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 OR8G3PP0DMU2 310 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 LTBRP36941 435 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 IGLV3-21P80748 117 aaPredicted RBP9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ST3GAL2Q16842 350 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 MED25Q71SY5 747 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 SLITRK4Q8IW52 837 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 CLRN3Q8NCR9 226 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ALG12Q9BV10 488 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 SLC39A1Q9NY26 324 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 ABRACLQ9P1F3 81 aa9.48□□□□□ -0.89
CLSTN1-203ENST00000435891 THADAQ6YHU6 1953 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 VPS13AQ96RL7 3174 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 EFCAB7A8K855 629 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 SERPINA3P01011 423 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 GFERP55789 205 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 FUT7Q11130 342 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 KLF9Q13886 244 aaPredicted RBP9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 KLHL26Q53HC5 615 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 SFRP4Q6FHJ7 346 aaPredicted RBP9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 UNQ9370/PRO34162Q6UXP9 181 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 C10orf53Q8N6V4 93 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 OR51J1Q9H342 316 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 MMP17Q9ULZ9 603 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF337Q9Y3M9 751 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 ARPC3O15145 178 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 LDOC1O95751 146 aaPredicted RBP9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 HPXP02790 462 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 GDNFP39905 211 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 CCINQ13939 588 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 C21orf62-AS1Q17RA5 79 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 GSG1Q2KHT4 349 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 ZNF684Q5T5D7 378 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 FCRLAQ7L513 359 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 FAM122BQ7Z309 247 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 DNAAF1Q8NEP3 725 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 NXPE2Q96DL1 559 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 G6PC3Q9BUM1 346 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 SRA1Q9HD15 236 aaKnown RBP9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 KLK11Q9UBX7 282 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 PCNX3Q9H6A9 2034 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 TRBV23-1A0A0A0MS06 115 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 TVP23AA6NH52 213 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 ZP3P21754 424 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 MEOX2P50222 304 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 FAAP20Q6NZ36 180 aa9.47□□□□□ -0.89
CLSTN1-203ENST00000435891 PRR22Q8IZ63 422 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms