RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TRAM1Q15629 374 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 C11orf87Q6NUJ2 197 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 TMEM220Q6QAJ8 160 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 TTLL10Q6ZVT0 673 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 NRIP2Q9BQI9 281 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 TCEAL7Q9BRU2 100 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SUCNR1Q9BXA5 334 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 TCF7L1Q9HCS4 588 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 ANKRD10Q9NXR5 420 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 PCDHGA1Q9Y5H4 931 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 NPIPA5A0A0B4J1W7 369 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 TRAV1-2A0A0B4J238 106 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SLC22A31A6NKX4 558 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 J3QRE1 110 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SLC16A5O15375 505 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SERPINA5P05154 406 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 MAKP20794 623 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 CD34P28906 385 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SMAD3P84022 425 aaKnown RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 FOXK2Q01167 660 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 FUT5Q11128 374 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SEMA6DQ8NFY4 1073 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 OR56A3Q8NH54 315 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SETD7Q8WTS6 366 aaKnown RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 GTF3AQ92664 365 aaKnown RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 LMLNQ96KR4 655 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 NECAB3Q96P71 396 aaPredicted RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 DEFB118Q96PH6 123 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 PLEKHA1Q9HB21 404 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 RHOFQ9HBH0 211 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SIDT1Q9NXL6 827 aaKnown RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 HCSTQ9UBK5 93 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 ST6GALNAC2Q9UJ37 374 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 USP34Q70CQ2 3546 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 PMP2P02689 132 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 ADH1AP07327 375 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SFTA3P0C7M3 94 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 CDK5R1Q15078 307 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 FAM46CQ5VWP2 391 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 UNQ6494/PRO21346Q6UXR6 183 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF561Q8N587 486 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 LURAP1Q96LR2 239 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 CAMK1GQ96NX5 476 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 IP6K3Q96PC2 410 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SEBOXQ9HB31 216 aaPredicted RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 ADGRL4Q9HBW9 690 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 TNFSF18Q9UNG2 199 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 TNS1Q9HBL0 1735 aaKnown RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 UNC119BA6NIH7 251 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 RIIAD1A6NNX1 92 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 MAN2B1O00754 1011 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 IMPA2O14732 288 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 AMY2AP04746 511 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 DCNP07585 359 aaKnown RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SPINT3P49223 89 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 PRKCZQ05513 592 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 PRSS55Q6UWB4 352 aaPredicted RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 ACOT7LQ6ZUV0 252 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SKA3Q8IX90 412 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 OR51D1Q8NGF3 324 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 METTL21AQ8WXB1 218 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 GPER1Q99527 375 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 ELF4Q99607 663 aaPredicted RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 TOLLIPQ9H0E2 274 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 UNKLQ9H9P5 680 aaKnown RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 A0A1B0GTH9 108 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 CBY3A6NI87 242 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 SLC38A8A6NNN8 435 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 HLA-AP01891 365 aaKnown RBP6.84□□□□□ -1.32
CPSF6-202ENST00000435070 F3P13726 295 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 EFNB2P52799 333 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 PPP2CBP62714 309 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 PPP2CAP67775 309 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 HTRA4P83105 476 aaPredicted RBP6.84□□□□□ -1.32
CPSF6-202ENST00000435070 AMZ1Q400G9 498 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 OR10K2Q6IF99 312 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 NXPE4Q6UWF7 544 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 ENPP7Q6UWV6 458 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 ABHD13Q7L211 337 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 SMIM19Q96E16 107 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 GPR62Q9BZJ7 368 aa6.84□□□□□ -1.32
CPSF6-202ENST00000435070 SLC35G4P0C7Q5 338 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 CD1CP29017 333 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 PRKAR1BP31321 381 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 RBM34P42696 430 aaKnown RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 PYY3Q5JQD4 70 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 BEND4Q6ZU67 534 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 MYADMQ96S97 322 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 EDEM2Q9BV94 578 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 CARHSP1Q9Y2V2 147 aaKnown RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 PAPPA2Q9BXP8 1791 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 A0A1B0GV50 99 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 MDFIC2A0A1B0GVS7 189 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 C9JQL5 133 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 NFKBIEO00221 500 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 OR2F2O95006 317 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 TYRP1P17643 537 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 MAPK3P27361 379 aaPredicted RBP6.83□□□□□ -1.32
CPSF6-202ENST00000435070 FXYD6P3P58550 94 aa6.83□□□□□ -1.32
CPSF6-202ENST00000435070 RPS11P62280 158 aaKnown RBP eCLIP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms