RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PALMDQ9NP74 551 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 MRPL39Q9NYK5 338 aaKnown RBP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 PLEKHB1Q9UF11 243 aaPredicted RBP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 FBXO9Q9UK97 447 aaPredicted RBP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 A0A1W2PRG6 482 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 MS4A18H0YCH9 400 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 PLPP2O43688 288 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 RGS9O75916 674 aaPredicted RBP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 GTF2E2P29084 291 aaKnown RBP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 MS4A18Q3C1V0 323 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 CDONQ4KMG0 1287 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 HES3Q5TGS1 186 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 B3GNTL1Q67FW5 361 aaPredicted RBP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 WDFY1Q8IWB7 410 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 LAX1Q8IWV1 398 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 PARP16Q8N5Y8 322 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 OR2T4Q8NH00 348 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 ZNF519Q8TB69 540 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 THAP4Q8WY91 577 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 PGLYRP3Q96LB9 341 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 SMAD5Q99717 465 aaKnown RBP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 TXNIPQ9H3M7 391 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 ST6GALNAC2Q9UJ37 374 aa15.01□□□□□ -0.01
USHBP1-203ENST00000431146 RPH3AQ9Y2J0 694 aaPredicted RBP15.01□□□□□ -0.01
USHBP1-203ENST00000431146 AKR7A3O95154 331 aa15□□□□□ -0.01
USHBP1-203ENST00000431146 PPP5CP53041 499 aa15□□□□□ -0.01
USHBP1-203ENST00000431146 MLF1P58340 268 aa15□□□□□ -0.01
USHBP1-203ENST00000431146 PUDPQ08623 228 aa15□□□□□ -0.01
USHBP1-203ENST00000431146 GPR50Q13585 617 aa15□□□□□ -0.01
USHBP1-203ENST00000431146 C5orf46Q6UWT4 87 aa15□□□□□ -0.01
USHBP1-203ENST00000431146 MDGA2Q7Z553 956 aa15□□□□□ -0.01
USHBP1-203ENST00000431146 NXPE2Q96DL1 559 aa15□□□□□ -0.01
USHBP1-203ENST00000431146 MRGPRX4Q96LA9 322 aa15□□□□□ -0.01
USHBP1-203ENST00000431146 JSRP1Q96MG2 331 aaPredicted RBP15□□□□□ -0.01
USHBP1-203ENST00000431146 UBL7Q96S82 380 aaPredicted RBP15□□□□□ -0.01
USHBP1-203ENST00000431146 ING1Q9UK53 422 aaPredicted RBP15□□□□□ -0.01
USHBP1-203ENST00000431146 MRPS18BQ9Y676 258 aaKnown RBP15□□□□□ -0.01
USHBP1-203ENST00000431146 A0A075B6Q4 140 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 A0A1W2PNR3 127 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 PRSS37A4D1T9 235 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 ETV2O00321 342 aaPredicted RBP14.99□□□□□ -0.01
USHBP1-203ENST00000431146 MTRF1O75570 445 aaKnown RBP14.99□□□□□ -0.01
USHBP1-203ENST00000431146 PSKH1P11801 424 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 SHC1P29353 583 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 CD40LGP29965 261 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 TNFSF8P32971 234 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 CENPAP49450 140 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 ACTA2P62736 377 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 ACTG2P63267 376 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 ETFDHQ16134 617 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 EEF1A1P5Q5VTE0 462 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 DMKNQ6E0U4 476 aaPredicted RBP14.99□□□□□ -0.01
USHBP1-203ENST00000431146 TIGD4Q8IY51 512 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 FADS6Q8N9I5 356 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 OR6N2Q8NGY6 317 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 MFSD8Q8NHS3 518 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 GHSRQ92847 366 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 ABTB1Q969K4 478 aaPredicted RBP14.99□□□□□ -0.01
USHBP1-203ENST00000431146 CEP19Q96LK0 163 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 GNRHR2Q96P88 292 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 CDC6Q99741 560 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 TSPAN10Q9H1Z9 355 aaPredicted RBP14.99□□□□□ -0.01
USHBP1-203ENST00000431146 PROK2Q9HC23 129 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 CPNE5Q9HCH3 593 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 HPF1Q9NWY4 346 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 CRNNQ9UBG3 495 aaPredicted RBP14.99□□□□□ -0.01
USHBP1-203ENST00000431146 MOKQ9UQ07 419 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 PRELID1Q9Y255 219 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 B3GNT3Q9Y2A9 372 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 CCDC187A0A096LP49 1063 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 ZNF208O43345 1280 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 IGHEP01854 428 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 GSTT2P0CG29 244 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 GSTT2BP0CG30 244 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 SFTPDP35247 375 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 DLX5P56178 289 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 TAS2R43P59537 309 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 RPS15P62841 145 aaKnown RBP14.99□□□□□ -0.01
USHBP1-203ENST00000431146 TLE3Q04726 772 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 MYBPHQ13203 477 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 SSPNQ14714 243 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 SLC25A53Q5H9E4 307 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 SLC16A9Q7RTY1 509 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 FAM83FQ8NEG4 500 aaPredicted RBP14.99□□□□□ -0.01
USHBP1-203ENST00000431146 MED18Q9BUE0 208 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 PARD6AQ9NPB6 346 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 ABCB10Q9NRK6 738 aa14.99□□□□□ -0.01
USHBP1-203ENST00000431146 LIPT2A6NK58 231 aa14.98□□□□□ -0.01
USHBP1-203ENST00000431146 SLC16A7O60669 478 aa14.98□□□□□ -0.01
USHBP1-203ENST00000431146 SULT1C4O75897 302 aa14.98□□□□□ -0.01
USHBP1-203ENST00000431146 HLA-DQA2P01906 255 aa14.98□□□□□ -0.01
USHBP1-203ENST00000431146 IFNGR1P15260 489 aa14.98□□□□□ -0.01
USHBP1-203ENST00000431146 GBX2P52951 348 aaPredicted RBP14.98□□□□□ -0.01
USHBP1-203ENST00000431146 POU3F1Q03052 451 aaPredicted RBP14.98□□□□□ -0.01
USHBP1-203ENST00000431146 H1FNTQ75WM6 255 aaPredicted RBP14.98□□□□□ -0.01
USHBP1-203ENST00000431146 DPY19L4Q7Z388 723 aa14.98□□□□□ -0.01
USHBP1-203ENST00000431146 CCDC190Q86UF4 302 aa14.98□□□□□ -0.01
USHBP1-203ENST00000431146 PLCZ1Q86YW0 608 aa14.98□□□□□ -0.01
USHBP1-203ENST00000431146 SLC7A5P1Q8MH63 180 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms