RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 IFITM5A6NNB3 132 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 PRR32B1ATL7 298 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 H7C1C5 153 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 K7ESF4 209 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 ARHGEF9O43307 516 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 GSTZ1O43708 216 aaPredicted RBP12.39□□□□□ -0.43
THBS3-202ENST00000428962 LANCL1O43813 399 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 UPK3AO75631 287 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 RPP14O95059 124 aaKnown RBP12.39□□□□□ -0.43
THBS3-202ENST00000428962 OR6A2O95222 327 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 AHSA1O95433 338 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 ABHD16AO95870 558 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 ARSBP15848 533 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 RPL27P61353 136 aaKnown RBP12.39□□□□□ -0.43
THBS3-202ENST00000428962 LCN6P62502 163 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 CD83Q01151 205 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 NTRK2Q16620 822 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 PLA1AQ53H76 456 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 LIPNQ5VXI9 398 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 LANCL3Q6ZV70 420 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 COX15Q7KZN9 410 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 KRT74Q7RTS7 529 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 OR6V1Q8N148 313 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 STT3BQ8TCJ2 826 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 AKAP1Q92667 903 aaKnown RBP eCLIP12.39□□□□□ -0.43
THBS3-202ENST00000428962 KLHDC3Q9BQ90 382 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 PTDSS2Q9BVG9 487 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 SYT4Q9H2B2 425 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 TCF7L1Q9HCS4 588 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 TAS2R5Q9NYW4 299 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 AKAP7Q9P0M2 348 aaPredicted RBP12.39□□□□□ -0.43
THBS3-202ENST00000428962 COPZ2Q9P299 210 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 KLHDC2Q9Y2U9 406 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 V9GY05 133 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 MPDZO75970 2070 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 IGLV3-12A0A075B6K2 115 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 A0A1B0GVC2 190 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 TVP23AA6NH52 213 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 A6NIN4 97 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 TMEM212A6NML5 194 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 IDSB3KWA1 339 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 PSMD9O00233 223 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 DCTN6O00399 190 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 PIN1P1O15428 100 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 OR2T1O43869 369 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 NPIPB7O75200 414 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 DHFRP00374 187 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 IGHMP01871 453 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 ANKRD34CP0C6C1 535 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 TFPIP10646 304 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 ALOX5APP20292 161 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 RRAS2P62070 204 aaPredicted RBP12.39□□□□□ -0.43
THBS3-202ENST00000428962 RNF4P78317 190 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 IFITM2Q01629 132 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 RASGEF1BQ0VAM2 473 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 NR0B2Q15466 257 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 C1orf140Q5VVS0 124 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 TMEM53Q6P2H8 277 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 SYT9Q86SS6 491 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 DTX3Q8N9I9 347 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 OR6S1Q8NH40 331 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 GPR119Q8TDV5 335 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 ASB17Q8WXJ9 295 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 RGP1Q92546 391 aaPredicted RBP12.39□□□□□ -0.43
THBS3-202ENST00000428962 YIPF5Q969M3 257 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 SLC25A36Q96CQ1 311 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 SEMA4CQ9C0C4 833 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 CLEC4AQ9UMR7 237 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 PCDHGA9Q9Y5G4 932 aaKnown RBP12.39□□□□□ -0.43
THBS3-202ENST00000428962 NUBP2Q9Y5Y2 271 aa12.39□□□□□ -0.43
THBS3-202ENST00000428962 A0A0B4J203 849 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 TRBV5-5A0A0J9YX44 114 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 C11orf98E9PRG8 122 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 DXOO77932 396 aaKnown RBP12.38□□□□□ -0.43
THBS3-202ENST00000428962 AKR7A3O95154 331 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 RAF1P04049 648 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 HEXBP07686 556 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 CALCBP10092 127 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 MYF5P13349 255 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 SUMO3P55854 103 aaPredicted RBP12.38□□□□□ -0.43
THBS3-202ENST00000428962 SIGLEC14Q08ET2 396 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 SQSTM1Q13501 440 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 CDK10Q15131 360 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 SHBQ15464 509 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 LYSMD4Q5XG99 296 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 LRRN1Q6UXK5 716 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 PM20D2Q8IYS1 436 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 OR4D9Q8NGE8 314 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 ZNF519Q8TB69 540 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 NSMAFQ92636 917 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
THBS3-202ENST00000428962 MAP6Q96JE9 813 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 ZFP3Q96NJ6 502 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 IER2Q9BTL4 223 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 TRAF4Q9BUZ4 470 aaPredicted RBP12.38□□□□□ -0.43
THBS3-202ENST00000428962 SLC25A18Q9H1K4 315 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 TXNIPQ9H3M7 391 aa12.38□□□□□ -0.43
THBS3-202ENST00000428962 ABCA7Q8IZY2 2146 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 PRSS37A4D1T9 235 aa12.37□□□□□ -0.43
THBS3-202ENST00000428962 ZNF254O75437 659 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms