RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ZNF584Q8IVC4 421 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 FAM71AQ8IYT1 594 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR8H3Q8N146 312 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 PYROXD2Q8N2H3 581 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 NOA1Q8NC60 698 aaKnown RBP3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR5T2Q8NGG2 359 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR10Q1Q8NGQ4 319 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 FNDC8Q8TC99 324 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 PIH1D2Q8WWB5 315 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 CAPSLQ8WWF8 208 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 HAS2Q92819 552 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 CELF6Q96J87 481 aaKnown RBP3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 FAM71F1Q96KD3 344 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 FAM218AQ96MZ4 157 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 LYSMD1Q96S90 227 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 MGME1Q9BQP7 344 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 ZNF559Q9BR84 538 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 TBCDQ9BTW9 1192 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 SPATA16Q9BXB7 569 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 OR2AG1Q9H205 316 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 RHBGQ9H310 441 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 SPACA1Q9HBV2 294 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 LZTFL1Q9NQ48 299 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 PARVAQ9NVD7 372 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 MRPL15Q9P015 296 aaKnown RBP3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 STX18Q9P2W9 335 aaKnown RBP3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 CTSZQ9UBR2 303 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 DNAJC12Q9UKB3 198 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 RPL26L1Q9UNX3 145 aaKnown RBP3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 RPH3AQ9Y2J0 694 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 MRPS2Q9Y399 296 aaKnown RBP3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 MAD1L1Q9Y6D9 718 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 COLEC10Q9Y6Z7 277 aa3.82□□□□□ -1.8
HMGB3P5-201ENST00000428894 COL6A5A8TX70 2615 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 TMEM120BA0PK00 339 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 RAB19A4D1S5 217 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 SIGLEC16A6NMB1 481 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 IDSB3KWA1 339 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 TMEM150CB9EJG8 249 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 ATP6V1G2-DDX39BF2Z307 99 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 H0YJX3 145 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 C19orf84I3L1E1 186 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 BET1O15155 118 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 PRPSAP2O60256 369 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 ERAL1O75616 437 aaKnown RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 SNAP29O95721 258 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 IFNB1P01574 187 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 IGKV3-15P01624 115 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 KRT8P05787 483 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 TFPTP0C1Z6 253 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 FAM228BP0C875 321 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 MYBL1P10243 752 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 TCP1P17987 556 aaKnown RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 ERCC2P18074 760 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 RAB4AP20338 218 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 CALB2P22676 271 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 MMP11P24347 488 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 HCAR3P49019 387 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 CDH6P55285 790 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 PPP1CAP62136 330 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 ELF3P78545 371 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 ABRQ12979 859 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 PNOCQ13519 176 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 SGCAQ16586 387 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 RGS21Q2M5E4 152 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 PARP6Q2NL67 630 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 THEM4Q5T1C6 240 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 CCNJQ5T5M9 372 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 ERMARDQ5T6L9 678 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 C1orf185Q5T7R7 199 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 RHBDD2Q6NTF9 364 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 WDR59Q6PJI9 974 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 CERS6Q6ZMG9 384 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 Q6ZPB1 254 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 RFLNAQ6ZTI6 216 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 TRMT10CQ7L0Y3 403 aaKnown RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 PEX26Q7Z412 305 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 CAMKMTQ7Z624 323 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 AMZ2Q86W34 360 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 LRRC6Q86X45 466 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 PHC2Q8IXK0 858 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 ELMOD2Q8IZ81 293 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 ACBD4Q8NC06 268 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 CATSPER1Q8NEC5 780 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 TSPAN14Q8NG11 270 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 NPRL2Q8WTW4 380 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 PHF10Q8WUB8 498 aaKnown RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 KRT35Q92764 455 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 GLYATL1Q969I3 302 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 TOMM40LQ969M1 308 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 TMIGD2Q96BF3 282 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 ZNF414Q96IQ9 312 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 C19orf43Q9BQ61 176 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 GPR61Q9BZJ8 451 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 POLR1EQ9GZS1 481 aaKnown RBP3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 C1orf21Q9H246 121 aa3.81□□□□□ -1.8
HMGB3P5-201ENST00000428894 HEXA-AS1Q9H8Q6 139 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms