RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ZNF775Q96BV0 537 aaPredicted RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 TXNDC15Q96J42 360 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 HRASLS5Q96KN8 279 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 CNBD2Q96M20 576 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 MUS81Q96NY9 551 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF385AQ96PM9 386 aaKnown RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 IL4I1Q96RQ9 567 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 EMC6Q9BV81 110 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 RNF122Q9H9V4 155 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 CALHM2Q9HA72 323 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 FANCFQ9NPI8 374 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 CMC2Q9NRP2 79 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 RASSF1Q9NS23 344 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 KLHL21Q9UJP4 597 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF346Q9UL40 294 aaKnown RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 NDRG4Q9ULP0 352 aaKnown RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 RAB26Q9ULW5 256 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 OSGIN2Q9Y236 505 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 RCE1Q9Y256 329 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF835Q9Y2P0 537 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 GPR52Q9Y2T5 361 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 NOSIPQ9Y314 301 aaKnown RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 EMC9Q9Y3B6 208 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 FAM215AQ9Y5M1 114 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 FLVCR1Q9Y5Y0 555 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 NCKAP5O14513 1909 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 HELZ2Q9BYK8 2649 aaKnown RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC35F4A4IF30 521 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 MBD3L4A6NDZ8 208 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 MBD3L3A6NE82 208 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 MBD3L5A6NJ08 208 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 FAM183AA6NL82 134 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF724A8MTY0 619 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 PRR23D1E9PI22 279 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 IMPA2O14732 288 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 TLX2O43763 284 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 PRKYO43930 277 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 SS18L1O75177 396 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 KRT33AO76009 404 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC2A10O95528 541 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 TXNDC12O95881 172 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 RENP00797 406 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 YES1P07947 543 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 PRR23D2P0DMB1 279 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 AGTR1P30556 359 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 CSNK1A1P48729 337 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 SELENOPP49908 381 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 TLE1Q04724 770 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 RUNX1T1Q06455 604 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 MRPL49Q13405 166 aaKnown RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 CRMP1Q14194 572 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 PDK3Q15120 406 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 ARMC4Q5T2S8 1044 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF691Q5VV52 312 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 RTL6Q6ICC9 239 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 KRT80Q6KB66 452 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 NIPAL3Q6P499 406 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 PLBD1Q6P4A8 553 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 LEG1Q6P5S2 330 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 PTCHD4Q6ZW05 846 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 CCDC71Q8IV32 467 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF100Q8IYN0 542 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 RPRMLQ8N4K4 120 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 SYT14Q8NB59 555 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 CYB561A3Q8NBI2 242 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC37A3Q8NCC5 494 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 NOXO1Q8NFA2 376 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR8J1Q8NGP2 316 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR9Q1Q8NGQ5 310 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR6N1Q8NGY5 312 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR6X1Q8NH79 312 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 MBD3L2Q8NHZ7 208 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 TMEM163Q8TC26 289 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF566Q969W8 418 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 APH1AQ96BI3 265 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 INTS12Q96CB8 462 aaKnown RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC25A44Q96H78 314 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 GMPPAQ96IJ6 420 aaPredicted RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 ADAD1Q96M93 576 aaKnown RBP7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR2M2Q96R28 347 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 NMNAT3Q96T66 252 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 ANKRD60Q9BZ19 345 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 SYT4Q9H2B2 425 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 FN3KQ9H479 309 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 RERGLQ9H628 205 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 C12orf49Q9H741 205 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 BCO1Q9HAY6 547 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 GP6Q9HCN6 339 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 DNAJC27Q9NZQ0 273 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 RNF6Q9Y252 685 aa7.03□□□□□ -1.28
HMGA1P4-201ENST00000428643 KALRNO60229 2985 aa7.02□□□□□ -1.28
HMGA1P4-201ENST00000428643 EML6Q6ZMW3 1958 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 PRSS37A4D1T9 235 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 M0R3G1 203 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 MPZL2O60487 215 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC43A1O75387 559 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 MRPL33O75394 65 aaKnown RBP7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 IL2RAP01589 272 aa7.02□□□□□ -1.29
HMGA1P4-201ENST00000428643 TMIGD3P0DMS9 266 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms