RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 KCTD14Q9BQ13 255 aaPredicted RBP8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PRSS27Q9BQR3 290 aa8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ZNF426Q9BUY5 554 aa8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ULBP2Q9BZM5 246 aa8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MYLK2Q9H1R3 596 aa8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 NELFAQ9H3P2 528 aa8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 GSX1Q9H4S2 264 aaPredicted RBP8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 EFCAB1Q9HAE3 211 aa8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 GPR35Q9HC97 309 aa8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 NANSQ9NR45 359 aa8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ZNF229Q9UJW7 825 aa8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ATP23Q9Y6H3 246 aa8.05□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ITPR3Q14573 2671 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ARPC4-TTLL3A0A0A6YYG9 625 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 GMNCA6NCL1 334 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CXCR6O00574 342 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SMAD7O15105 426 aaKnown RBP8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 RNF13O43567 381 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PIP5K1CO60331 668 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 TMCC2O75069 709 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 HIST1H2ABP04908 130 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PAX1P15863 534 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 RBM34P42696 430 aaKnown RBP8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 YAP1P46937 504 aaKnown RBP8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CSNK1A1P48729 337 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 FABP6P51161 128 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 IDH3GP51553 393 aaPredicted RBP8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 BIDP55957 195 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 NPRL3Q12980 569 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CAMK2DQ13557 499 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MELKQ14680 651 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PHYHD1Q5SRE7 291 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 AGAP6Q5VW22 663 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PRSS57Q6UWY2 283 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 HACD2Q6Y1H2 254 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 HIST3H2AQ7L7L0 130 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PXKQ7Z7A4 578 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 VTCN1Q7Z7D3 282 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CPLX4Q7Z7G2 160 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 DTX2Q86UW9 622 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 NKAIN4Q8IVV8 208 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 C20orf196Q8IYI0 205 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 FBXL14Q8N1E6 418 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 TMEM239Q8WW34 195 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 HIST1H2ACQ93077 130 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 FAM162AQ96A26 154 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CMTM5Q96DZ9 223 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SGTBQ96EQ0 304 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 C18orf12Q96KH6 178 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PRRC1Q96M27 445 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SLC38A2Q96QD8 506 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SMR3AQ99954 134 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 DHRS9Q9BPW9 319 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 HOPXQ9BPY8 73 aaPredicted RBP8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 KCNS3Q9BQ31 491 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 TRAF4Q9BUZ4 470 aaPredicted RBP8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 POLR2J2Q9GZM3 115 aaKnown RBP8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 POLR2J3Q9H1A7 115 aaKnown RBP8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SEC61A2Q9H9S3 476 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 B3GAT2Q9NPZ5 323 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MEPEQ9NQ76 525 aaPredicted RBP8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 C20orf141Q9NUB4 165 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 RIMS3Q9UJD0 308 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MOKQ9UQ07 419 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MED31Q9Y3C7 131 aa8.04□□□□□ -1.12
RFX3-AS1-202ENST00000427722 FREM1Q5H8C1 2179 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PRR14LQ5THK1 2151 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 IGHV1-18A0A0C4DH31 117 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ZNF503-AS2A6NEH8 195 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ZNF99A8MXY4 864 aaPredicted RBP8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 BLOC1S5-TXNDC5H3BN57 136 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 RPL36A-HNRNPH2H7BZ11 118 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 OVOL3O00110 214 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 NDUFAB1O14561 156 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 OR7A10O76100 309 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SERPINA1P01009 418 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CD8AP01732 235 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 IGHV4-39P01824 125 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 MT-ND1P03886 318 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 IFNW1P05000 195 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CELA3BP08861 270 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 INHBBP09529 407 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ASAH2BP0C7U1 165 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 CECR9P0C854 216 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 THRBP10828 461 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 B4GALT1P15291 398 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 FOSL1P15407 271 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 NCK1P16333 377 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PRDX6P30041 224 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 IFNA8P32881 189 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 TTKP33981 857 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 RIPPLY3P57055 190 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 PSME3P61289 254 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SELENOWP63302 87 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 IFI44LQ53G44 452 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 C1QTNF12Q5T7M4 302 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 C8orf82Q6P1X6 216 aaPredicted RBP8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SLC35D2Q76EJ3 337 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 SYT9Q86SS6 491 aa8.03□□□□□ -1.12
RFX3-AS1-202ENST00000427722 ALDH16A1Q8IZ83 802 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms