RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 ATP23Q9Y6H3 246 aa16.68■□□□□ 0.26
COL9A2-204ENST00000427563 NIPBLQ6KC79 2804 aaeCLIP16.68■□□□□ 0.26
COL9A2-204ENST00000427563 NSD1Q96L73 2696 aaPredicted RBP16.67■□□□□ 0.26
COL9A2-204ENST00000427563 OR5F1O95221 314 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 LY6G6DO95868 133 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 IGKV3-15P01624 115 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 CECR9P0C854 216 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 IFNGR1P15260 489 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 ACVR1BP36896 505 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 SELENOWP63302 87 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 VTCN1Q7Z7D3 282 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 MUC15Q8N387 334 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 LRR1Q96L50 414 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 BDH2Q9BUT1 245 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 NOX3Q9HBY0 568 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 NANSQ9NR45 359 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 CBLN4Q9NTU7 201 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 ZNF224Q9NZL3 707 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 ZNF229Q9UJW7 825 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 A4GNTQ9UNA3 340 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 SNX13Q9Y5W8 968 aa16.67■□□□□ 0.26
COL9A2-204ENST00000427563 FN1P02751 2386 aaKnown RBP16.67■□□□□ 0.26
COL9A2-204ENST00000427563 ZNF99A8MXY4 864 aaPredicted RBP16.66■□□□□ 0.26
COL9A2-204ENST00000427563 AKAP8O43823 692 aaKnown RBP16.66■□□□□ 0.26
COL9A2-204ENST00000427563 MT-ND1P03886 318 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 HOXB1P14653 301 aaPredicted RBP16.66■□□□□ 0.26
COL9A2-204ENST00000427563 GSK3BP49841 420 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 FABP6P51161 128 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 BIDP55957 195 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 TAS2R41P59536 307 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 UBE2NP61088 152 aaKnown RBP16.66■□□□□ 0.26
COL9A2-204ENST00000427563 MELKQ14680 651 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 CLEC12BQ2HXU8 276 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 MST1LQ2TV78 715 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 AGAP6Q5VW22 663 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 CSPG4Q6UVK1 2322 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 HACD2Q6Y1H2 254 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 ARPINQ7Z6K5 226 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 TMEM54Q969K7 222 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 CMTM5Q96DZ9 223 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 POM121Q96HA1 1249 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 TPD52L3Q96J77 140 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 ZNF75AQ96N20 296 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 CACNG6Q9BXT2 260 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 MAN2C1Q9NTJ4 1040 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 ARL8BQ9NVJ2 186 aa16.66■□□□□ 0.26
COL9A2-204ENST00000427563 J3KTA2 159 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 PIP5K1CO60331 668 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 OR7A10O76100 309 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 TSPAN19P0C672 248 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 FUT1P19526 365 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 NUDT2P50583 147 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 NAAAQ02083 359 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 RUNX1T1Q06455 604 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 KRT72Q14CN4 511 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 C3orf36Q3SXR2 165 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 ZNF544Q6NX49 715 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 CLEC9AQ6UXN8 241 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 SLC35D2Q76EJ3 337 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 ZNF627Q7L945 461 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 TSEN54Q7Z6J9 526 aaKnown RBP16.65■□□□□ 0.26
COL9A2-204ENST00000427563 MDP1Q86V88 176 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 FAM169BQ8N8A8 192 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 TMEM239Q8WW34 195 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 HTRA1Q92743 480 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 TRMT61AQ96FX7 289 aaKnown RBP16.65■□□□□ 0.26
COL9A2-204ENST00000427563 HOPXQ9BPY8 73 aaPredicted RBP16.65■□□□□ 0.26
COL9A2-204ENST00000427563 KATNB1Q9BVA0 655 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 POLR2J2Q9GZM3 115 aaKnown RBP16.65■□□□□ 0.26
COL9A2-204ENST00000427563 POLR2J3Q9H1A7 115 aaKnown RBP16.65■□□□□ 0.26
COL9A2-204ENST00000427563 ALG2Q9H553 416 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 FAIMQ9NVQ4 179 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 B3GNT2Q9NY97 397 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 ABCD2Q9UBJ2 740 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 TLN2Q9Y4G6 2542 aa16.65■□□□□ 0.26
COL9A2-204ENST00000427563 CXCR6O00574 342 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 FFAR1O14842 300 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 IFNA14P01570 189 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 CBR1P16152 277 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 RBM34P42696 430 aaKnown RBP16.64■□□□□ 0.25
COL9A2-204ENST00000427563 YAP1P46937 504 aaKnown RBP16.64■□□□□ 0.25
COL9A2-204ENST00000427563 HGFACQ04756 655 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 RPL18Q07020 188 aaKnown RBP16.64■□□□□ 0.25
COL9A2-204ENST00000427563 KRTAP1-1Q07627 177 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 CBLL1Q75N03 491 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 TRPM8Q7Z2W7 1104 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 FBXL14Q8N1E6 418 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 DEPDC4Q8N2C3 294 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 MAPK1IP1LQ8NDC0 245 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 RBM15BQ8NDT2 890 aaKnown RBP16.64■□□□□ 0.25
COL9A2-204ENST00000427563 OR6X1Q8NH79 312 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 ULBP2Q9BZM5 246 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 EFCAB1Q9HAE3 211 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 TAGLN3Q9UI15 199 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 AP3M1Q9Y2T2 418 aa16.64■□□□□ 0.25
COL9A2-204ENST00000427563 ZNF726A6NNF4 738 aa16.63■□□□□ 0.25
COL9A2-204ENST00000427563 RNF13O43567 381 aa16.63■□□□□ 0.25
COL9A2-204ENST00000427563 PRSS23O95084 383 aa16.63■□□□□ 0.25
COL9A2-204ENST00000427563 IGF2P01344 180 aa16.63■□□□□ 0.25
COL9A2-204ENST00000427563 HLA-HP01893 362 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms