RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CNEP1R1Q8N9A8 125 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 OR8D4Q8NGM9 314 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 OR6K3Q8NGY3 331 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 SLC25A44Q96H78 314 aaPredicted RBP13.68□□□□□ -0.22
COL11A1-204ENST00000427239 TXNDC15Q96J42 360 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 ERMAPQ96PL5 475 aaPredicted RBP13.68□□□□□ -0.22
COL11A1-204ENST00000427239 PLSCR4Q9NRQ2 329 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 MED29Q9NX70 200 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 SMPD3Q9NY59 655 aaPredicted RBP13.68□□□□□ -0.22
COL11A1-204ENST00000427239 IER3IP1Q9Y5U9 82 aa13.68□□□□□ -0.22
COL11A1-204ENST00000427239 A0A0G2JNJ9 132 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 SLC35F4A4IF30 521 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 A6NIZ1 184 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 CENPBD1B2RD01 187 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 H0YJX3 145 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 TNFSF13O75888 250 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 ZNF432O94892 652 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 BIDP55957 195 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 RAP1BP61224 184 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 RAP1AP62834 184 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 MYBPC1Q00872 1141 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 FOXF2Q12947 444 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 GINS1Q14691 196 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 ARMC4Q5T2S8 1044 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 NAXEQ8NCW5 288 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 LRR1Q96L50 414 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 TSPAN32Q96QS1 320 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 Q9UFV3 132 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 ADAM18Q9Y3Q7 739 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 XKRYO14609 159 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 PPP1R3DO95685 299 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 HMGN1P05114 100 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 NTF4P34130 210 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 ZNF100Q8IYN0 542 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 ASB10Q8WXI3 467 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 APH1AQ96BI3 265 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 STARD4Q96DR4 205 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 ZNF570Q96NI8 536 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 GRIP2Q9C0E4 1043 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 RIBC2Q9H4K1 309 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 COQ3Q9NZJ6 369 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 ERRFI1Q9UJM3 462 aaPredicted RBP13.67□□□□□ -0.22
COL11A1-204ENST00000427239 SLC5A6Q9Y289 635 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 KIAA1549Q9HCM3 1950 aa13.67□□□□□ -0.22
COL11A1-204ENST00000427239 DVL2O14641 736 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 AHCYL1O43865 530 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 SLC43A1O75387 559 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 SNAP29O95721 258 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 ACVR1BP36896 505 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 TOP3AQ13472 1001 aaPredicted RBP13.66□□□□□ -0.22
COL11A1-204ENST00000427239 NIPAL3Q6P499 406 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 CASP12Q6UXS9 341 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 NUFIP2Q7Z417 695 aaKnown RBP13.66□□□□□ -0.22
COL11A1-204ENST00000427239 ADCK1Q86TW2 530 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 ZNF519Q8TB69 540 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 FNDC8Q8TC99 324 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 ZNF566Q969W8 418 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 Q96M85 177 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 OR2M2Q96R28 347 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 EMC6Q9BV81 110 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 MRPL13Q9BYD1 178 aaKnown RBP13.66□□□□□ -0.22
COL11A1-204ENST00000427239 PRRG3Q9BZD7 231 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 PIGMQ9H3S5 423 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 TOR3AQ9H497 397 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 SLC25A19Q9HC21 320 aa13.66□□□□□ -0.22
COL11A1-204ENST00000427239 PHF3Q92576 2039 aaKnown RBP13.66□□□□□ -0.22
COL11A1-204ENST00000427239 MYO18BQ8IUG5 2567 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 ZAR1LA6NP61 321 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 CNOT4O95628 575 aaKnown RBP13.65□□□□□ -0.22
COL11A1-204ENST00000427239 IGHG1P01857 330 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 CD8BP10966 210 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 NR2C1P13056 603 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 ACADSP16219 412 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 EPHA2P29317 976 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 GRK5P34947 590 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 POLR2IP36954 125 aaKnown RBP13.65□□□□□ -0.22
COL11A1-204ENST00000427239 VHLP40337 213 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 OR3A2P47893 321 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 SELENOPP49908 381 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 SIRPAP78324 504 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 MELKQ14680 651 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 ZIK1Q3SY52 487 aaPredicted RBP13.65□□□□□ -0.22
COL11A1-204ENST00000427239 ACSM5Q6NUN0 579 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 TMEM123Q8N131 208 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 POMGNT2Q8NAT1 580 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 ASB5Q8WWX0 329 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 CCDC120Q96HB5 630 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 HRASLS5Q96KN8 279 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 RNF6Q9Y252 685 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 MED12LQ86YW9 2145 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 UBR5O95071 2799 aaPredicted RBP13.65□□□□□ -0.22
COL11A1-204ENST00000427239 DOCK7Q96N67 2140 aa13.65□□□□□ -0.22
COL11A1-204ENST00000427239 TEX13CA0A0J9YWL9 993 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 DLGAP1O14490 977 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 ARHGEF9O43307 516 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 CGAP01215 116 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 CHRNB4P30926 498 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 CAMK2DQ13557 499 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 PGGHGQ32M88 737 aa13.64□□□□□ -0.23
COL11A1-204ENST00000427239 TMEM236Q5W0B7 351 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms