RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ALG10Q5BKT4 473 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SLC35D3Q5M8T2 416 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 TMUB2Q71RG4 321 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 GRAMD2AQ8IUY3 354 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 OR4C16Q8NGL9 310 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 OR6M1Q8NGM8 313 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 PHOSPHO1Q8TCT1 267 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SP7Q8TDD2 431 aaPredicted RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 C3orf49Q96BT1 292 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SCARF2Q96GP6 870 aaPredicted RBP6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 MOGAT1Q96PD6 335 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 PPA2Q9H2U2 334 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 GDE1Q9NZC3 331 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 PFDN2Q9UHV9 154 aa6.86□□□□□ -1.31
SMARCC1-202ENST00000425518 SUSD5O60279 629 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 TSPAN9O75954 239 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 EGFP01133 1207 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 LPLP06858 475 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 CALCBP10092 127 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 FAUP35544 74 aaKnown RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 RAB38P57729 211 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 PRPS1P60891 318 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 C1orf61Q13536 156 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 GRM7Q14831 915 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 TMEM81Q6P7N7 255 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 PARM1Q6UWI2 310 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 LRRC69Q6ZNQ3 347 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 SLC51BQ86UW2 128 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 OOSP2Q86WS3 158 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 OR51S1Q8NGJ8 323 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 TSEN15Q8WW01 171 aaKnown RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 PMM1Q92871 262 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 CHST6Q9GZX3 395 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 TCEAL2Q9H3H9 227 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 WDR76Q9H967 626 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 CPNE7Q9UBL6 633 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 GRHPRQ9UBQ7 328 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 KIF25Q9UIL4 384 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 KCNMB2Q9Y691 235 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 UPK3AO75631 287 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 GLSO94925 669 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 KDM4BO94953 1096 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 SPDEFO95238 335 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 KLF8O95600 359 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 NMBP08949 121 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 HOXD4P09016 255 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 KIR2DL1P43626 348 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 H2BFSP57053 126 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 MRPS10P82664 201 aaKnown RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 IKZF1Q13422 519 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 OLFML2AQ68BL7 652 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 SLC6A19Q695T7 634 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 SEZ6L2Q6UXD5 910 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 SLC16A9Q7RTY1 509 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF227Q86WZ6 799 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 MUC20Q8N307 709 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 EID2Q8N6I1 236 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 FGF14Q92915 247 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 CCDC74AQ96AQ1 378 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 VSTM2LQ96N03 204 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 NMNAT2Q9BZQ4 307 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 MYEF2Q9P2K5 600 aaKnown RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 RABL2AQ9UBK7 228 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 RABL2BQ9UNT1 228 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 OR2M5A3KFT3 312 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 TGFBR3LH3BV60 316 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 OIP5O43482 229 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 CTNSO60931 367 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 APBB3O95704 486 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 HIST1H2ABP04908 130 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 IL5P05113 134 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 CD1AP06126 327 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 CA3P07451 260 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 CD14P08571 375 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 CPN1P15169 458 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 ST6GAL1P15907 406 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 MAOAP21397 527 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 MAPK3P27361 379 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 SORDQ00796 357 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 ALG11Q2TAA5 492 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 DCAF12L2Q5VW00 463 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 ARMC6Q6NXE6 501 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 CBLN3Q6UW01 205 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 HIST3H2AQ7L7L0 130 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 TMED4Q7Z7H5 227 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 BCORP1Q8N888 145 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 OR2G2Q8NGZ5 317 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 C16orf52Q8NHV5 167 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 DUSP19Q8WTR2 217 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 HERVK_113Q902F9 699 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 ST8SIA4Q92187 359 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 HIST1H2ACQ93077 130 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 PPP1R14AQ96A00 147 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 RNF166Q96A37 237 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 LCORQ96JN0 433 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 DGAT2Q96PD7 388 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 COMMD4Q9H0A8 199 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 EXO5Q9H790 373 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 MED11Q9P086 117 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 FBXL2Q9UKC9 423 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms