RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 LSRQ86X29 649 aaPredicted RBP14.03□□□□□ -0.16
SHOX2-202ENST00000425436 GHDCQ8N2G8 530 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 KLHL36Q8N4N3 616 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 NDNFQ8TB73 568 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 TMEM234Q8WY98 164 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 DACH2Q96NX9 599 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 GPX7Q96SL4 187 aaPredicted RBP14.03□□□□□ -0.16
SHOX2-202ENST00000425436 OR2B2Q9GZK3 357 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 MMP27Q9H306 513 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 PLSCR2Q9NRY7 297 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 NDUFB11Q9NX14 153 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 SPRR3Q9UBC9 169 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 SSR3Q9UNL2 185 aa14.03□□□□□ -0.16
SHOX2-202ENST00000425436 NPIPA2E9PIF3 369 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 NPIPA3F8WFD2 350 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 SLC2A10O95528 541 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 HIST1H2ABP04908 130 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 ADRA2AP08913 450 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 PTNP21246 168 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 GNLYP22749 145 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 CXCR1P25024 350 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 SOX6P35712 828 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 ZNF41P51814 821 aaPredicted RBP14.02□□□□□ -0.16
SHOX2-202ENST00000425436 BDH1Q02338 343 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 LGALS3BPQ08380 585 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 TPBGQ13641 420 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 FHL1Q13642 323 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 SLC35F1Q5T1Q4 408 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 RAET1LQ5VY80 246 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 HIST3H2AQ7L7L0 130 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 ACBD7Q8N6N7 88 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 SLC37A3Q8NCC5 494 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 ST6GALNAC3Q8NDV1 305 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 NEIL3Q8TAT5 605 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 RPL3LQ92901 407 aaKnown RBP14.02□□□□□ -0.16
SHOX2-202ENST00000425436 HIST1H2ACQ93077 130 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 OTULINQ96BN8 352 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 ERMAPQ96PL5 475 aaPredicted RBP14.02□□□□□ -0.16
SHOX2-202ENST00000425436 COQ7Q99807 217 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 WDR12Q9GZL7 423 aaKnown RBP14.02□□□□□ -0.16
SHOX2-202ENST00000425436 HMG20AQ9NP66 347 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 NANSQ9NR45 359 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 CCDC59Q9P031 241 aaKnown RBP14.02□□□□□ -0.16
SHOX2-202ENST00000425436 CHRNA9Q9UGM1 479 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 STUB1Q9UNE7 303 aa14.02□□□□□ -0.16
SHOX2-202ENST00000425436 CAB39Q9Y376 341 aaPredicted RBP14.02□□□□□ -0.16
SHOX2-202ENST00000425436 MRPS18CQ9Y3D5 142 aaKnown RBP14.02□□□□□ -0.16
SHOX2-202ENST00000425436 LOC100506127A0A0U1RQW1 187 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 A0A1B0GVC2 190 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 SUSD5O60279 629 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 PPP1R3DO95685 299 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 INHBBP09529 407 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 TACR3P29371 465 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 RPL4P36578 427 aaKnown RBP14.01□□□□□ -0.17
SHOX2-202ENST00000425436 UQCRFS1P47985 274 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 STARP49675 285 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 POLR2HP52434 150 aaKnown RBP14.01□□□□□ -0.17
SHOX2-202ENST00000425436 B3GALT5-AS1P59052 145 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 RPS4XP62701 263 aaKnown RBP14.01□□□□□ -0.17
SHOX2-202ENST00000425436 QPRTQ15274 297 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 SSX1Q16384 188 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 ZNF74Q16587 644 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 EIF2S3LQ2VIR3 472 aaKnown RBP14.01□□□□□ -0.17
SHOX2-202ENST00000425436 PLPPR5Q32ZL2 321 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 EMC4Q5J8M3 183 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 LCN1P1Q5VSP4 162 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 PHC2Q8IXK0 858 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 UFD1Q92890 307 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 PTP4A1Q93096 173 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 RELTQ969Z4 430 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 SFXN2Q96NB2 322 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 TEAD3Q99594 435 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 SH3GL3Q99963 347 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 CHCHD6Q9BRQ6 235 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 ENKD1Q9H0I2 346 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 OR51E2Q9H255 320 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 FKRPQ9H9S5 495 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 NRIP3Q9NQ35 241 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 ZNF229Q9UJW7 825 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 HIF3AQ9Y2N7 669 aa14.01□□□□□ -0.17
SHOX2-202ENST00000425436 IGKV1D-42A0A075B6H8 117 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 OR2M5A3KFT3 312 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 FAM47E-STBD1D6RA91 191 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 J3QRE1 110 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 AQP7O14520 342 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 AKAP8O43823 692 aaKnown RBP14□□□□□ -0.17
SHOX2-202ENST00000425436 MT-ATP6P00846 226 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 OPN1LWP04000 364 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 LIMS3P0CW19 117 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 LIMS4P0CW20 117 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 PTGS2P35354 604 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 MAP2K6P52564 334 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 GFRA1P56159 465 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 ACTC1P68032 377 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 ACTA1P68133 377 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 GPR50Q13585 617 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 ZNF846Q147U1 533 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 SLC35D3Q5M8T2 416 aa14□□□□□ -0.17
SHOX2-202ENST00000425436 ZNF362Q5T0B9 420 aaPredicted RBP14□□□□□ -0.17
SHOX2-202ENST00000425436 GRINAQ7Z429 371 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms