RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SIAH3Q8IW03 269 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 GRPEL2Q8TAA5 225 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 NR4A3Q92570 626 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 TMEM43Q9BTV4 400 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 CHIAQ9BZP6 476 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 LIN7BQ9HAP6 207 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 KLRF1Q9NZS2 232 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 PCDHGB2Q9Y5G2 931 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 PMS2P1A4D2B8 440 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF593O00488 134 aaPredicted RBP10.79□□□□□ -0.68
PTPRN-204ENST00000423636 FMO6PO60774 539 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 IL33O95760 270 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 PRKAR1AP10644 381 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF28P17035 718 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 SRMP19623 302 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 F8A1P23610 371 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 UBE2MP61081 183 aaKnown RBP10.79□□□□□ -0.68
PTPRN-204ENST00000423636 HBMQ6B0K9 141 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 DPY19L2P2Q6ZN68 376 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 CMTM4Q8IZR5 234 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF501Q96CX3 271 aaPredicted RBP10.79□□□□□ -0.68
PTPRN-204ENST00000423636 SPACA5Q96QH8 159 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 TAS2R5Q9NYW4 299 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 ELF5Q9UKW6 265 aaPredicted RBP10.79□□□□□ -0.68
PTPRN-204ENST00000423636 LILRA5A6NI73 299 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 EFCAB7A8K855 629 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 CENPXA8MT69 81 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 IGKV3-11P04433 115 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 EPXP11678 715 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 CCL4P13236 92 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 CCKBRP32239 447 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 MAGEA8P43361 318 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 OC90Q02509 493 aaPredicted RBP10.79□□□□□ -0.68
PTPRN-204ENST00000423636 SERTAD2Q14140 314 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 RNLSQ5VYX0 342 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 FAM205BPQ63HN1 556 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF544Q6NX49 715 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 LRFN4Q6PJG9 635 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 PLXDC2Q6UX71 529 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 LINC00299Q6ZSB3 139 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 GDPD1Q8N9F7 314 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 SMIM19Q96E16 107 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 WDFY2Q96P53 400 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 TEKT2Q9UIF3 430 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 COA3Q9Y2R0 106 aaPredicted RBP10.79□□□□□ -0.68
PTPRN-204ENST00000423636 MYO7BQ6PIF6 2116 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 TMED7-TICAM2A0A0A6YYA0 188 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 INMT-MINDY4F8WBC2 141 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 XKRYO14609 159 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 OR2J2O76002 312 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 PNPP00491 289 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 GLB1P16278 677 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 PITPNBP48739 271 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 NRG3P56975 720 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 TOMM20Q15388 145 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 GLB1L2Q8IW92 636 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 TOR1AIP2Q8NFQ8 470 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 OR10G3Q8NGC4 313 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 OR8S1Q8NH09 359 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 ITFG2Q969R8 447 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 RFT1Q96AA3 541 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 WDR89Q96FK6 387 aaPredicted RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 C5orf34Q96MH7 638 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 TMED7Q9Y3B3 224 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 LOC100509620A0A075B734 347 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 A0A1B0GX78 115 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 HTR3EA5X5Y0 456 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 H3BMH7 237 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 GMDSO60547 372 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 OR2T7P0C7T2 308 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 GP1BBP13224 206 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 GUCA2AQ02747 115 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 NTRK2Q16620 822 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 PAPD4Q6PIY7 484 aaKnown RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 GRAMD2AQ8IUY3 354 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 OR2T27Q8NH04 317 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 TSEN15Q8WW01 171 aaKnown RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 TMEM106AQ96A25 262 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF578Q96N58 590 aaPredicted RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 SLC46A1Q96NT5 459 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 TWSG1Q9GZX9 223 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 GAREM1Q9H706 876 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 ELOVL3Q9HB03 270 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 B9D1Q9UPM9 204 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 TRAPPC4Q9Y296 219 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 ZFHX2Q9C0A1 2572 aaPredicted RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF407Q9C0G0 2248 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 DMXL2Q8TDJ6 3036 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 IGHV3-15A0A0B4J1V0 119 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 DCDC2BA2VCK2 349 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 TRABD2BA6NFA1 517 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 CSN2P05814 226 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 CDAP32320 146 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 EFNB2P52799 333 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 RAB15P59190 212 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 RNF4P78317 190 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 ADAM8P78325 824 aa10.78□□□□□ -0.68
PTPRN-204ENST00000423636 IGLV3-21P80748 117 aaPredicted RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 POU3F1Q03052 451 aaPredicted RBP10.78□□□□□ -0.68
PTPRN-204ENST00000423636 ELAVL1Q15717 326 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms