RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MED29Q9NX70 200 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.95□□□□□ -0.18
COL18A1-205ENST00000423214 SERPINI2O75830 405 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 HLA-DOBP13765 273 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 B4GALT1P15291 398 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 SLC6A2P23975 617 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 IL2RGP31785 369 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 RPS23P62266 143 aaKnown RBP13.94□□□□□ -0.18
COL18A1-205ENST00000423214 GALK2Q01415 458 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 PMS2P3Q13401 168 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 CCNIQ14094 377 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 SCARB2Q14108 478 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 GLIPR1L2Q4G1C9 344 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 PHYHD1Q5SRE7 291 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 GKAP1Q5VSY0 366 aaPredicted RBP13.94□□□□□ -0.18
COL18A1-205ENST00000423214 COMTD1Q86VU5 262 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 MSRB3Q8IXL7 192 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 C20orf196Q8IYI0 205 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 C10orf111Q8N326 155 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 OR6S1Q8NH40 331 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 MRPL24Q96A35 216 aaKnown RBP13.94□□□□□ -0.18
COL18A1-205ENST00000423214 MS4A3Q96HJ5 214 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 LRR1Q96L50 414 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 NPHS2Q9NP85 383 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 VAPAQ9P0L0 249 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 ANGPT4Q9Y264 503 aa13.94□□□□□ -0.18
COL18A1-205ENST00000423214 A0A0B4J2E0 115 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 A0A1B0GX12 115 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 TMEM129A0AVI4 362 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 ZNF726A6NNF4 738 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 EVPLLA8MZ36 301 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 MS4A18H0YCH9 400 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 TCF21O43680 179 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 SYNGR3O43761 229 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 EDF1O60869 148 aaKnown RBP13.93□□□□□ -0.18
COL18A1-205ENST00000423214 LILRA1O75019 489 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 HPRP00739 348 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 BGLAPP02818 100 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 PCMT1P22061 227 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 NR4A1P22736 598 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 AQP1P29972 269 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 LSP1P33241 339 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 PTDSS1P48651 473 aaKnown RBP13.93□□□□□ -0.18
COL18A1-205ENST00000423214 CDH15P55291 814 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 PIGFQ07326 219 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 SF3A3Q12874 501 aaKnown RBP eCLIP13.93□□□□□ -0.185e-7■■■■■ 46.7
COL18A1-205ENST00000423214 CAMK2DQ13557 499 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 OR1Q1Q15612 314 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 TRIP10Q15642 601 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 MS4A18Q3C1V0 323 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 SWT1Q5T5J6 900 aaKnown RBP13.93□□□□□ -0.18
COL18A1-205ENST00000423214 RINLQ6ZS11 566 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 ARMC8Q8IUR7 673 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 RFLNBQ8N5W9 214 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 SLC41A3Q96GZ6 507 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 FOXB1Q99853 325 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 MRPL37Q9BZE1 423 aaKnown RBP13.93□□□□□ -0.18
COL18A1-205ENST00000423214 EVA1AQ9H8M9 152 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 MRPL39Q9NYK5 338 aaKnown RBP13.93□□□□□ -0.18
COL18A1-205ENST00000423214 TMEFF2Q9UIK5 374 aaPredicted RBP13.93□□□□□ -0.18
COL18A1-205ENST00000423214 FBXL3Q9UKT7 428 aa13.93□□□□□ -0.18
COL18A1-205ENST00000423214 NBEAL1Q6ZS30 2694 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 TPST1O60507 370 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 SERPINB7O75635 380 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 UBL3O95164 117 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 C8BP07358 591 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 ZNF14P17017 642 aaPredicted RBP13.92□□□□□ -0.18
COL18A1-205ENST00000423214 AHCYP23526 432 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 CSNK1A1P48729 337 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 EVX1P49640 407 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 ATP4BP51164 291 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 RIN1Q13671 783 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 REP15Q6BDI9 236 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 HIPK4Q8NE63 616 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 MOGAT1Q96PD6 335 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 SYT3Q9BQG1 590 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 TMEM43Q9BTV4 400 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 MS4A5Q9H3V2 200 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 IKZF5Q9H5V7 419 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 DENND2DQ9H6A0 471 aaPredicted RBP13.92□□□□□ -0.18
COL18A1-205ENST00000423214 TMEM38AQ9H6F2 299 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 ZNF446Q9NWS9 450 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 B3GNT2Q9NY97 397 aa13.92□□□□□ -0.18
COL18A1-205ENST00000423214 A0A0G2JND7 137 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 C11orf98E9PRG8 122 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 LYNX1G3V0Z9 82 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 ENTPD5O75356 428 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 OR6A2O95222 327 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 MT-ATP6P00846 226 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 ADORA3P0DMS8 318 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 LYNX1P0DP58 116 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 CDH12P55289 794 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 ZNF627Q7L945 461 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 PXKQ7Z7A4 578 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 GLCCI1Q86VQ1 547 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 OR5J2Q8NH18 312 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 TXNDC15Q96J42 360 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 RSPO3Q9BXY4 272 aaPredicted RBP13.91□□□□□ -0.18
COL18A1-205ENST00000423214 REV1Q9UBZ9 1251 aa13.91□□□□□ -0.18
COL18A1-205ENST00000423214 TRBV5-3A0A0A0MS03 114 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms