RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 FASP25445 335 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 RPL4P36578 427 aaKnown RBP8.19□□□□□ -1.1
PDGFC-202ENST00000422544 CD79BP40259 229 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 GSSP48637 474 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 BIDP55957 195 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 CTXN1P60606 82 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 LGALS3BPQ08380 585 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 FAPQ12884 760 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 TSPAN31Q12999 210 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 CAMK2DQ13557 499 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 MELKQ14680 651 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 TSC22D1Q15714 1073 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 ATP6AP1Q15904 470 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 ACKR1Q16570 336 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 ANKDD1AQ495B1 522 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 TSPO2Q5TGU0 170 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 FBXW9Q5XUX1 488 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 SP5Q6BEB4 398 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-202ENST00000422544 SLC35D2Q76EJ3 337 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 CXorf67Q86X51 503 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-202ENST00000422544 GABRG1Q8N1C3 465 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 LINC00471Q8N535 108 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 LRRC75AQ8NAA5 344 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 GIPC3Q8TF64 312 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 GTPBP3Q969Y2 492 aaKnown RBP8.19□□□□□ -1.1
PDGFC-202ENST00000422544 LRRC46Q96FV0 321 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 OR2M2Q96R28 347 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 FEVQ99581 238 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 SEMA6AQ9H2E6 1030 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 ELOVL5Q9NYP7 299 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 PDP1Q9P0J1 537 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-202ENST00000422544 UPB1Q9UBR1 384 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 IL20RAQ9UHF4 553 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 FOXD3Q9UJU5 478 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF346Q9UL40 294 aaKnown RBP8.19□□□□□ -1.1
PDGFC-202ENST00000422544 RCE1Q9Y256 329 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 SIGLEC7Q9Y286 467 aa8.19□□□□□ -1.1
PDGFC-202ENST00000422544 MAGED1Q9Y5V3 778 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-202ENST00000422544 MCIDASD6RGH6 385 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 C16orf97H3BN30 126 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 AKAP8O43823 692 aaKnown RBP8.18□□□□□ -1.1
PDGFC-202ENST00000422544 SLC43A1O75387 559 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 KRT33AO76009 404 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 NDUFB2O95178 105 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 CNOT4O95628 575 aaKnown RBP8.18□□□□□ -1.1
PDGFC-202ENST00000422544 FCGR1AP12314 374 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 IGHV1-2P23083 117 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 UGT2B10P36537 528 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 ARHGDIAP52565 204 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 FOXG1P55316 489 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-202ENST00000422544 FXYD6P3P58550 94 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 PRPS1P60891 318 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 ERVK-25P63136 954 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 RUNX1T1Q06455 604 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 TOP3AQ13472 1001 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-202ENST00000422544 GK3PQ14409 553 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 PHYHD1Q5SRE7 291 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 C9orf135Q5VTT2 229 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 ANKRD34AQ69YU3 496 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 HMBOX1Q6NT76 420 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 ZFP1Q6P2D0 407 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 SHQ1Q6PI26 577 aaKnown RBP8.18□□□□□ -1.1
PDGFC-202ENST00000422544 SMARCD3Q6STE5 483 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 THSD4Q6ZMP0 1018 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 STAC2Q6ZMT1 411 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 Q6ZT83 130 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 LINGO2Q7L985 606 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 C10orf67Q8IYJ2 551 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 TMEM123Q8N131 208 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 POMGNT2Q8NAT1 580 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 OR6X1Q8NH79 312 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 LINC01560Q8TB33 94 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 PKP2Q99959 881 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 BDH2Q9BUT1 245 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 SLCO5A1Q9H2Y9 848 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 S100A14Q9HCY8 104 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 ASB6Q9NWX5 421 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 MGAT4BQ9UQ53 548 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 SPG11Q96JI7 2443 aa8.18□□□□□ -1.1
PDGFC-202ENST00000422544 OR6C65A6NJZ3 312 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 M0R3G1 203 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 LYZL6O75951 148 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 CD14P08571 375 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 IGFBP1P08833 259 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 PRF1P14222 555 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 CDH2P19022 906 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 DAP3P51398 398 aaKnown RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 RPL27P61353 136 aaKnown RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 ITGADQ13349 1161 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 P2RY6Q15077 328 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 TAF11Q15544 211 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 RFX4Q33E94 735 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 ARMC4Q5T2S8 1044 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 SFRP5Q5T4F7 317 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 MEX3BQ6ZN04 569 aaKnown RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 KIF18BQ86Y91 864 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 C20orf196Q8IYI0 205 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 GPR137CQ8N3F9 429 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF433Q8N7K0 673 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 OR6N1Q8NGY5 312 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms