RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 TMEM54Q969K7 222 aa12.92□□□□□ -0.34
LINC01840-201ENST00000421870 SLC38A2Q96QD8 506 aa12.92□□□□□ -0.34
LINC01840-201ENST00000421870 FAM107BQ9H098 131 aa12.92□□□□□ -0.34
LINC01840-201ENST00000421870 NSRP1Q9H0G5 558 aaKnown RBP12.92□□□□□ -0.34
LINC01840-201ENST00000421870 GSX1Q9H4S2 264 aaPredicted RBP12.92□□□□□ -0.34
LINC01840-201ENST00000421870 B3GNT2Q9NY97 397 aa12.92□□□□□ -0.34
LINC01840-201ENST00000421870 POU2F3Q9UKI9 436 aa12.92□□□□□ -0.34
LINC01840-201ENST00000421870 MOKQ9UQ07 419 aa12.92□□□□□ -0.34
LINC01840-201ENST00000421870 ZFHX3Q15911 3703 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 OR7A10O76100 309 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 APOBEC3AP31941 199 aaPredicted RBP12.91□□□□□ -0.34
LINC01840-201ENST00000421870 CDKN1AP38936 164 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 BIDP55957 195 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 PSME3P61289 254 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 CARD17Q5XLA6 110 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 DNM1P46Q6ZS02 220 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 SLC35D2Q76EJ3 337 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 VTCN1Q7Z7D3 282 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 MUC15Q8N387 334 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 PFN4Q8NHR9 129 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 GTPBP3Q969Y2 492 aaKnown RBP12.91□□□□□ -0.34
LINC01840-201ENST00000421870 SLC25A44Q96H78 314 aaPredicted RBP12.91□□□□□ -0.34
LINC01840-201ENST00000421870 COX4I2Q96KJ9 171 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 PRRC1Q96M27 445 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 KATNB1Q9BVA0 655 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 B3GAT2Q9NPZ5 323 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 CBLN4Q9NTU7 201 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 C20orf141Q9NUB4 165 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 MED31Q9Y3C7 131 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 SNX13Q9Y5W8 968 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 ATP23Q9Y6H3 246 aa12.91□□□□□ -0.34
LINC01840-201ENST00000421870 ARFGEF3Q5TH69 2177 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 ZNF503-AS2A6NEH8 195 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 ATP6V1G2-DDX39BF2Z307 99 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 BLOC1S5-TXNDC5H3BN57 136 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 FFAR1O14842 300 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 GSTA4O15217 222 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 RNF13O43567 381 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 UMPSP11172 480 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 FUT4P22083 530 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 ARR3P36575 388 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 FABP6P51161 128 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 GNGT1P63211 74 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 TUBA1BP68363 451 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 TUBA4AP68366 448 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 NAAAQ02083 359 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 HIST3H3Q16695 136 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 LRFN4Q6PJG9 635 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 TUBA1AQ71U36 451 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 FBXL14Q8N1E6 418 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 OR6N1Q8NGY5 312 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 SGTBQ96EQ0 304 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 ZNF75AQ96N20 296 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 SMR3AQ99954 134 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 ULBP2Q9BZM5 246 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 MAN2C1Q9NTJ4 1040 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 GLTPQ9NZD2 209 aa12.9□□□□□ -0.34
LINC01840-201ENST00000421870 TRIM64A6NGJ6 449 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 TRIM64BA6NI03 449 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 H7C1Q1 480 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 NDUFS7O75251 213 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 SERPINI2O75830 405 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 PRSS23O95084 383 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 SERPINA1P01009 418 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 IGHV4-39P01824 125 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 CRYAAP02489 173 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 IFNW1P05000 195 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 CECR9P0C854 216 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 IFNA8P32881 189 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 CSNK1A1P48729 337 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 LSM11P83369 360 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC01840-201ENST00000421870 RPL18Q07020 188 aaKnown RBP12.89□□□□□ -0.35
LINC01840-201ENST00000421870 LAPTM4AQ15012 233 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 SWI5Q1ZZU3 235 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 MST1LQ2TV78 715 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 IFI44LQ53G44 452 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 PIWIL3Q7Z3Z3 882 aaKnown RBP12.89□□□□□ -0.35
LINC01840-201ENST00000421870 NANOGNBQ7Z5D8 188 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 TSEN54Q7Z6J9 526 aaKnown RBP12.89□□□□□ -0.35
LINC01840-201ENST00000421870 RNF113BQ8IZP6 322 aaKnown RBP12.89□□□□□ -0.35
LINC01840-201ENST00000421870 OFCC1Q8IZS5 231 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 IL17RDQ8NFM7 739 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 GEMIN6Q8WXD5 167 aaKnown RBP12.89□□□□□ -0.35
LINC01840-201ENST00000421870 ZNF566Q969W8 418 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 SEPHS2Q99611 448 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 KCTD14Q9BQ13 255 aaPredicted RBP12.89□□□□□ -0.35
LINC01840-201ENST00000421870 MRPL13Q9BYD1 178 aaKnown RBP12.89□□□□□ -0.35
LINC01840-201ENST00000421870 SPAG4Q9NPE6 437 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 POFUT2Q9Y2G5 429 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 ARL2BPQ9Y2Y0 163 aa12.89□□□□□ -0.35
LINC01840-201ENST00000421870 NPIPB13A6NJU9 1138 aa12.88□□□□□ -0.35
LINC01840-201ENST00000421870 FAM171A2A8MVW0 826 aa12.88□□□□□ -0.35
LINC01840-201ENST00000421870 CENPBD1B2RD01 187 aa12.88□□□□□ -0.35
LINC01840-201ENST00000421870 NPIPB4C9JG80 1138 aa12.88□□□□□ -0.35
LINC01840-201ENST00000421870 J3KTA2 159 aa12.88□□□□□ -0.35
LINC01840-201ENST00000421870 ZNF682O95780 498 aa12.88□□□□□ -0.35
LINC01840-201ENST00000421870 BCL10O95999 233 aa12.88□□□□□ -0.35
LINC01840-201ENST00000421870 PGA4P0DJD7 388 aa12.88□□□□□ -0.35
LINC01840-201ENST00000421870 PGA3P0DJD8 388 aa12.88□□□□□ -0.35
LINC01840-201ENST00000421870 AQP2P41181 271 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms