RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CLRN1P58418 232 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 PPP1R8Q12972 351 aaKnown RBP13.86□□□□□ -0.19
BRAT1-202ENST00000421712 TAB1Q15750 504 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 ANKDD1AQ495B1 522 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 ZBED5Q49AG3 693 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 TIMM23BQ5SRD1 257 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 OR2T5Q6IEZ7 315 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 KLHL24Q6TFL4 600 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 NHLRC1Q6VVB1 395 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 IGFN1Q86VF2 1251 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 P2RY8Q86VZ1 359 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 C20orf196Q8IYI0 205 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 TMEM123Q8N131 208 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 OR2T29Q8NH02 315 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 OR52N5Q8NH56 324 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 OR6X1Q8NH79 312 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 PIK3IP1Q96FE7 263 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 SLC25A44Q96H78 314 aaPredicted RBP13.86□□□□□ -0.19
BRAT1-202ENST00000421712 LRR1Q96L50 414 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 POLDIP3Q9BY77 421 aaKnown RBP13.86□□□□□ -0.19
BRAT1-202ENST00000421712 ULBP2Q9BZM5 246 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 YY1AP1Q9H869 796 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 CRLF2Q9HC73 371 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 GPR35Q9HC97 309 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 NGBQ9NPG2 151 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 SAMHD1Q9Y3Z3 626 aaKnown RBP13.86□□□□□ -0.19
BRAT1-202ENST00000421712 U3KQV3 271 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 A0A1W2PR80 420 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 UNC119BA6NIH7 251 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 OR5H1A6NKK0 313 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 PDLIM1O00151 329 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 CTAG2O75638 210 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 CCNB2O95067 398 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 IGHG1P01857 330 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 HOXB6P17509 224 aaKnown RBP13.85□□□□□ -0.19
BRAT1-202ENST00000421712 PRPS1P60891 318 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 PPA1Q15181 289 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 GABRA6Q16445 453 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 ACKR1Q16570 336 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 CEACAM16Q2WEN9 425 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 PHYHD1Q5SRE7 291 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 LINGO2Q7L985 606 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 HDDC2Q7Z4H3 204 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 ZER1Q7Z7L7 766 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 GNPDA2Q8TDQ7 276 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 MUS81Q96NY9 551 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 FUZQ9BT04 418 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 CLEC4MQ9H2X3 399 aaPredicted RBP13.85□□□□□ -0.19
BRAT1-202ENST00000421712 TXNIPQ9H3M7 391 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 RASSF1Q9NS23 344 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.85□□□□□ -0.19
BRAT1-202ENST00000421712 POFUT2Q9Y2G5 429 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 LYVE1Q9Y5Y7 322 aa13.85□□□□□ -0.19
BRAT1-202ENST00000421712 ANKHD1Q8IWZ3 2542 aaKnown RBP13.84□□□□□ -0.19
BRAT1-202ENST00000421712 A0A096LPE4 126 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 A0A1W2PPZ6 126 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 TCRBV3S1A0A5B6 114 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 TSPAN19P0C672 248 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 ACADSP16219 412 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 HMGA2P52926 109 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 UBE2NP61088 152 aaKnown RBP13.84□□□□□ -0.19
BRAT1-202ENST00000421712 RPS4XP62701 263 aaKnown RBP13.84□□□□□ -0.19
BRAT1-202ENST00000421712 ASRGL1Q7L266 308 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 WDFY1Q8IWB7 410 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 LINC00471Q8N535 108 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 SYT14Q8NB59 555 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 C1orf162Q8NEQ5 155 aaPredicted RBP13.84□□□□□ -0.19
BRAT1-202ENST00000421712 ASB10Q8WXI3 467 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 GLTPQ9NZD2 209 aa13.84□□□□□ -0.19
BRAT1-202ENST00000421712 STX18Q9P2W9 335 aaKnown RBP13.84□□□□□ -0.19
BRAT1-202ENST00000421712 ZNF346Q9UL40 294 aaKnown RBP13.84□□□□□ -0.19
BRAT1-202ENST00000421712 RPL36A-HNRNPH2H7BZ11 118 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 FKBP6O75344 327 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 TRMUO75648 421 aaKnown RBP13.83□□□□□ -0.2
BRAT1-202ENST00000421712 NDUFB2O95178 105 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 GOSR1O95249 250 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 ACVR1BP36896 505 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 LIMS1P48059 325 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 SH3BGRP55822 239 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-202ENST00000421712 RPL27P61353 136 aaKnown RBP13.83□□□□□ -0.2
BRAT1-202ENST00000421712 ERVK-25P63136 954 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 ARF1P84077 181 aaKnown RBP13.83□□□□□ -0.2
BRAT1-202ENST00000421712 RUNX1T1Q06455 604 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 HIKESHIQ53FT3 197 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 BEX5Q5H9J7 111 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 ANKRD16Q6P6B7 361 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 C17orf78Q8N4C9 275 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 OR9Q2Q8NGE9 314 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 OR1K1Q8NGR3 316 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 ZNF837Q96EG3 531 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-202ENST00000421712 PLPPR2Q96GM1 343 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 KATNB1Q9BVA0 655 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 C1QTNF6Q9BXI9 259 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 SLC17A5Q9NRA2 495 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 GRHPRQ9UBQ7 328 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 IL20RAQ9UHF4 553 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 AMDHD2Q9Y303 409 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 PRR14LQ5THK1 2151 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 CELSR2Q9HCU4 2923 aa13.83□□□□□ -0.2
BRAT1-202ENST00000421712 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms