RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 BGLAPP02818 100 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 GLRXP35754 106 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 CCL8P80075 99 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 GLO1Q04760 184 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 STX3Q13277 289 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 SLC9B1Q4ZJI4 515 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 AWAT1Q58HT5 328 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 FAM69AQ5T7M9 428 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 GKAP1Q5VSY0 366 aaPredicted RBP11□□□□□ -0.65
LINC00339-203ENST00000420503 SLC2A7Q6PXP3 512 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 UEVLDQ8IX04 471 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 SKA3Q8IX90 412 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 MIER2Q8N344 545 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 ZDHHC22Q8N966 263 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 ANKK1Q8NFD2 765 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 FAM216AQ8WUB2 273 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 ZFAND2BQ8WV99 257 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 TLCD1Q96CP7 247 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 TMBIM4Q9HC24 238 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 ARGLU1Q9NWB6 273 aaPredicted RBP11□□□□□ -0.65
LINC00339-203ENST00000420503 GRIP1Q9Y3R0 1128 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 TGP01266 2768 aa11□□□□□ -0.65
LINC00339-203ENST00000420503 TRAV36DV7A0A075B6V5 113 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 A0A0A6YYJ9 748 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 A0A0G2JPF8 293 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 VSTM5A8MXK1 200 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 HNRNPCL2B2RXH8 293 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 HNRNPCL3B7ZW38 293 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 SLCO1B7G3V0H7 640 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 HNRNPCL1O60812 293 aaKnown RBP10.99□□□□□ -0.65
LINC00339-203ENST00000420503 DEAF1O75398 565 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-203ENST00000420503 PNPP00491 289 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 HNRNPCL4P0DMR1 293 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 NQO1P15559 274 aaKnown RBP10.99□□□□□ -0.65
LINC00339-203ENST00000420503 HOXB9P17482 250 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-203ENST00000420503 ARFIP2P53365 341 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 RAB1AP62820 205 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 RGNQ15493 299 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 TRMT5Q32P41 509 aaKnown RBP10.99□□□□□ -0.65
LINC00339-203ENST00000420503 C6orf10Q5SRN2 563 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 NXNQ6DKJ4 435 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 MSRB3Q8IXL7 192 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 OR51F2Q8NH61 342 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 NFKBIDQ8NI38 313 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 RNF217Q8TC41 542 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 ZNF418Q8TF45 676 aaPredicted RBP10.99□□□□□ -0.65
LINC00339-203ENST00000420503 SLC38A4Q969I6 547 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 SLC41A3Q96GZ6 507 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 DUX5Q96PT3 197 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 OR52B2Q96RD2 323 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 FOXB1Q99853 325 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 PAIP2Q9BPZ3 127 aaKnown RBP10.99□□□□□ -0.65
LINC00339-203ENST00000420503 ULBP2Q9BZM5 246 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 PAIP1Q9H074 479 aaKnown RBP10.99□□□□□ -0.65
LINC00339-203ENST00000420503 CENPHQ9H3R5 247 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 ZNF665Q9H7R5 613 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 VIPAS39Q9H9C1 493 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 SLC25A37Q9NYZ2 338 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 CALML5Q9NZT1 146 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 SLAMF8Q9P0V8 285 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 TAAR3PQ9P1P4 343 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 POFUT2Q9Y2G5 429 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 PCDHGB1Q9Y5G3 927 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 NOX1Q9Y5S8 564 aa10.99□□□□□ -0.65
LINC00339-203ENST00000420503 C11orf98E9PRG8 122 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 SLC22A3O75751 556 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 MPZL1O95297 269 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 ANP32DO95626 131 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 TFP02787 698 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 ZCCHC18P0CG32 403 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 PAX7P23759 505 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 EVX1P49640 407 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 WDR4P57081 412 aaKnown RBP10.98□□□□□ -0.65
LINC00339-203ENST00000420503 TXNL4AP83876 142 aaKnown RBP10.98□□□□□ -0.65
LINC00339-203ENST00000420503 PDCD4Q53EL6 469 aaKnown RBP10.98□□□□□ -0.65
LINC00339-203ENST00000420503 SPRNQ5BIV9 151 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 ALG10BQ5I7T1 473 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 ZNF627Q7L945 461 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 HDXQ7Z353 690 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 ANKRD42Q8N9B4 389 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 IL17RDQ8NFM7 739 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 OR6N1Q8NGY5 312 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 ZBTB18Q99592 522 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 SH3GL3Q99963 347 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 MS4A5Q9H3V2 200 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 MOV10Q9HCE1 1003 aaKnown RBP10.98□□□□□ -0.65
LINC00339-203ENST00000420503 BCL2L10Q9HD36 194 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 A4GALTQ9NPC4 353 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 RPS6KB2Q9UBS0 482 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 OPN4Q9UHM6 478 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 ZNF232Q9UNY5 417 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 PPIAL4AQ9Y536 164 aa10.98□□□□□ -0.65
LINC00339-203ENST00000420503 TRAV20A0A0B4J274 112 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 LOC102725191A0A1B0GVB3 256 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 TM9SF1O15321 606 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 SASH3O75995 380 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 RAB36O95755 333 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 PCMT1P22061 227 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 AQP1P29972 269 aa10.97□□□□□ -0.65
LINC00339-203ENST00000420503 BIDP55957 195 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms