RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 RTN4RQ9BZR6 473 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 C11orf54Q9H0W9 315 aaPredicted RBP13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 COPZ2Q9P299 210 aa13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZNF346Q9UL40 294 aaKnown RBP13.16□□□□□ -0.3
HLA-DPA1-242ENST00000419277 LOC102723996A0A087X1L8 192 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TRBV11-1A0A0K0K1C0 115 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 TMEM72A0PK05 275 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FAM47E-STBD1D6RA91 191 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 FTCDNL1E5RQL4 147 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PLPP3O14495 311 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ADAM10O14672 748 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 LYRM1O43325 122 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 NCR1O76036 304 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 MRPS10P82664 201 aaKnown RBP13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DAB2P98082 770 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZXDAP98168 799 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PUDPQ08623 228 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 UBE2NLQ5JXB2 153 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 OR6V1Q8N148 313 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RFLNBQ8N5W9 214 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 OR5AK2Q8NH90 309 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ZPLD1Q8TCW7 415 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DUSP19Q8WTR2 217 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SLC25A43Q8WUT9 341 aaPredicted RBP13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 DEDD2Q8WXF8 326 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PIGKQ92643 395 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RFT1Q96AA3 541 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CREB3L1Q96BA8 519 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ADAD1Q96M93 576 aaKnown RBP13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 CTRCQ99895 268 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 WDR77Q9BQA1 342 aaPredicted RBP13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 SYT4Q9H2B2 425 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 RNF121Q9H920 327 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 MYOTQ9UBF9 498 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 B3GALT5Q9Y2C3 310 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 ETV7Q9Y603 341 aa13.15□□□□□ -0.3
HLA-DPA1-242ENST00000419277 A0A1W2PNV4 684 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TTLL8A6PVC2 850 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CENPXA8MT69 81 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 MEN1O00255 615 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 NTN3O00634 580 aaPredicted RBP13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ARHGEF9O43307 516 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNF254O75437 659 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SERPINI2O75830 405 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 KLK3P07288 261 aaPredicted RBP13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 FBXO45P0C2W1 286 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CALCBP10092 127 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SPNP16150 400 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SRMP19623 302 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ADH6P28332 368 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 GRPRP30550 384 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 MMP15P51511 669 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNF41P51814 821 aaPredicted RBP13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ROM1Q03395 351 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CBX3Q13185 183 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TOMM34Q15785 309 aaPredicted RBP13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 EXT1Q16394 746 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ACKR1Q16570 336 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 NTRK2Q16620 822 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SLC18B1Q6NT16 456 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SLC23A3Q6PIS1 610 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 YIPF7Q8N8F6 280 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SLC38A9Q8NBW4 561 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNF417Q8TAU3 575 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 DERL3Q96Q80 235 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 OR14A2Q96R54 314 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 WACQ9BTA9 647 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TRAF4Q9BUZ4 470 aaPredicted RBP13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 PPIL3Q9H2H8 161 aaKnown RBP13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SERINC1Q9NRX5 453 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNF275Q9NSD4 429 aaPredicted RBP13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ALKBH4Q9NXW9 302 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 GPN3Q9UHW5 284 aaPredicted RBP13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNF221Q9UK13 617 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 FBXO4Q9UKT5 387 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 PRUNE2Q8WUY3 3088 aa13.14□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TRBV5-5A0A0J9YX44 114 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 MEIOCA2RUB1 952 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SMIM30A4D0T7 59 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 B4DXG7 233 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 C9J4A7 227 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 TP53I11O14683 189 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ORC5O43913 435 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 UPK3AO75631 287 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CCNKO75909 580 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZFPL1O95159 310 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 CFIP05156 583 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 RAB40ALP0C0E4 278 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 ZNF883P0CG24 379 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 HLA-DMAP28067 261 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 DDOSTP39656 456 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 EIF1P41567 113 aaKnown RBP13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 SELENBP1Q13228 472 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 LIPNQ5VXI9 398 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 OR6N2Q8NGY6 317 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 GPR148Q8TDV2 347 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 RAB40AQ8WXH6 277 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 KLRF1Q9NZS2 232 aa13.13□□□□□ -0.31
HLA-DPA1-242ENST00000419277 PPP4R1LQ9P1A2 415 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms