RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ELAC2Q9BQ52 826 aaKnown RBP14.34□□□□□ -0.11
LINC00404-201ENST00000418660 NF1P21359 2839 aa14.33□□□□□ -0.11
LINC00404-201ENST00000418660 VPS13CQ709C8 3753 aa14.33□□□□□ -0.11
LINC00404-201ENST00000418660 RNF13O43567 381 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 IGF2P01344 180 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 MT-ND1P03886 318 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 CECR9P0C854 216 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 THRBP10828 461 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 BMP4P12644 408 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 ARR3P36575 388 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 BIDP55957 195 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 NAAAQ02083 359 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 LIPEQ05469 1076 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 PIN1Q13526 163 aaPredicted RBP14.33□□□□□ -0.12
LINC00404-201ENST00000418660 DNM1P46Q6ZS02 220 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 SLC35D2Q76EJ3 337 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 ZNF627Q7L945 461 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 SLC46A3Q7Z3Q1 461 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 TREML1Q86YW5 311 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 NKAIN4Q8IVV8 208 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 OR6X1Q8NH79 312 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 TPD52L3Q96J77 140 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 ULBP2Q9BZM5 246 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 POFUT2Q9Y2G5 429 aa14.33□□□□□ -0.12
LINC00404-201ENST00000418660 H7C417 338 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 SEC14L2O76054 403 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 UMPSP11172 480 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 CSNK1A1P48729 337 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 SEC24CP53992 1094 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 UGT2B15P54855 530 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 RAB35Q15286 201 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 C8orf82Q6P1X6 216 aaPredicted RBP14.32□□□□□ -0.12
LINC00404-201ENST00000418660 HACD2Q6Y1H2 254 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 ZNF813Q6ZN06 617 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 NANOGNBQ7Z5D8 188 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 TMEM255BQ8WV15 326 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 TMEM239Q8WW34 195 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 LZICQ8WZA0 190 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 TMEM54Q969K7 222 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 GMPR2Q9P2T1 348 aaKnown RBP14.32□□□□□ -0.12
LINC00404-201ENST00000418660 PMF1-BGLAPU3KQ54 211 aa14.32□□□□□ -0.12
LINC00404-201ENST00000418660 ZNF503-AS2A6NEH8 195 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 RNF223E7ERA6 249 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 BLOC1S5-TXNDC5H3BN57 136 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 CXCR6O00574 342 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 NME4O00746 187 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 SSX4O60224 188 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 OR7A10O76100 309 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 FUT1P19526 365 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 CALCRP30988 508 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 CAPZA2P47755 286 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 IDH3GP51553 393 aaPredicted RBP14.31□□□□□ -0.12
LINC00404-201ENST00000418660 SLC7A2P52569 658 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 ST3GAL3Q11203 375 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 SWI5Q1ZZU3 235 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 MST1LQ2TV78 715 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 KRTAP21-3Q3LHN1 58 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 MDP1Q86V88 176 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 IL17RDQ8NFM7 739 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 OR4F15Q8NGB8 312 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 PFN4Q8NHR9 129 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 LIPHQ8WWY8 451 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 ZNF566Q969W8 418 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 SGTBQ96EQ0 304 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 SLC25A44Q96H78 314 aaPredicted RBP14.31□□□□□ -0.12
LINC00404-201ENST00000418660 REG4Q9BYZ8 158 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 MYLK2Q9H1R3 596 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 SEC61A2Q9H9S3 476 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 CA10Q9NS85 328 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 B3GNT2Q9NY97 397 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 MED31Q9Y3C7 131 aa14.31□□□□□ -0.12
LINC00404-201ENST00000418660 NDUFAB1O14561 156 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 GSTA4O15217 222 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 BCL10O95999 233 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 CELA3BP08861 270 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 IFNA8P32881 189 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 NUDT2P50583 147 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 NUDT6P53370 316 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 MYPOPQ86VE0 399 aaPredicted RBP14.3□□□□□ -0.12
LINC00404-201ENST00000418660 NANOS1Q8WY41 292 aaKnown RBP14.3□□□□□ -0.12
LINC00404-201ENST00000418660 CMTM5Q96DZ9 223 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 FBXO17Q96EF6 278 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 PRRC1Q96M27 445 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 FOXB1Q99853 325 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 NSRP1Q9H0G5 558 aaKnown RBP14.3□□□□□ -0.12
LINC00404-201ENST00000418660 GLTPQ9NZD2 209 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 A4GNTQ9UNA3 340 aa14.3□□□□□ -0.12
LINC00404-201ENST00000418660 HTR3EA5X5Y0 456 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 PDE5AO76074 875 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 HLA-HP01893 362 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 TSPAN19P0C672 248 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 SERPINF1P36955 418 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 GSK3BP49841 420 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 DSCR9P59020 149 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 HGFACQ04756 655 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 RPL18Q07020 188 aaKnown RBP14.29□□□□□ -0.12
LINC00404-201ENST00000418660 NPRL3Q12980 569 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 MELKQ14680 651 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 GSG1Q2KHT4 349 aa14.29□□□□□ -0.12
LINC00404-201ENST00000418660 LRFN4Q6PJG9 635 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms