RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ABCA2Q9BZC7 2435 aa18.05■□□□□ 0.48
PTPRU-203ENST00000415600 A6NHS1 94 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 ZNF716A6NP11 495 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 IGFBP5P24593 272 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 HMGA2P52926 109 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 LAPTM4AQ15012 233 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 C1QTNF12Q5T7M4 302 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 FAHD1Q6P587 224 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 TMEM108Q6UXF1 575 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 CYP4Z1Q86W10 505 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 DEPDC4Q8N2C3 294 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 ZNF433Q8N7K0 673 aaPredicted RBP18.04■□□□□ 0.48
PTPRU-203ENST00000415600 ZNF555Q8NEP9 628 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 SMR3AQ99954 134 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 UPB1Q9UBR1 384 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 MALT1Q9UDY8 824 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 IFT52Q9Y366 437 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 J3KTA2 159 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 AP3D1O14617 1153 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 SMAD7O15105 426 aaKnown RBP18.04■□□□□ 0.48
PTPRU-203ENST00000415600 THBS1P07996 1170 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 SMIM18P0DKX4 95 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 LIMS1P48059 325 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 RNF220Q5VTB9 566 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 WBP2NLQ6ICG8 309 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 PAQR6Q6TCH4 344 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 CASP12Q6UXS9 341 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 Q71RC1 249 aaPredicted RBP18.04■□□□□ 0.48
PTPRU-203ENST00000415600 TAPBPLQ9BX59 468 aa18.04■□□□□ 0.48
PTPRU-203ENST00000415600 PRR14LQ5THK1 2151 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 TMEM72A0PK05 275 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 CDHR4A6H8M9 788 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 SLC16A6O15403 523 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 RAD51DO75771 328 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 CLIC3O95833 236 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 LGI1O95970 557 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 PTAFRP25105 342 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 IDUAP35475 653 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 YAP1P46937 504 aaKnown RBP18.03■□□□□ 0.48
PTPRU-203ENST00000415600 CDH12P55289 794 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 H3F3AP84243 136 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.03■□□□□ 0.48
PTPRU-203ENST00000415600 PIK3C3Q8NEB9 887 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 GIPC3Q8TF64 312 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 CISD1Q9NZ45 108 aaKnown RBP18.03■□□□□ 0.48
PTPRU-203ENST00000415600 KIF17Q9P2E2 1029 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 MYRFQ9Y2G1 1151 aa18.03■□□□□ 0.48
PTPRU-203ENST00000415600 TRIM64A6NGJ6 449 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 TRIM64BA6NI03 449 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 GADD45GO95257 159 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 LY6G6DO95868 133 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 IGHV3-9P01782 118 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 CDH2P19022 906 aaPredicted RBP18.02■□□□□ 0.48
PTPRU-203ENST00000415600 FAPQ12884 760 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 ABHD12BQ7Z5M8 362 aaPredicted RBP18.02■□□□□ 0.48
PTPRU-203ENST00000415600 CCDC103Q8IW40 242 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 OFCC1Q8IZS5 231 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 CADM2Q8N3J6 435 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 ATG16L2Q8NAA4 619 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 OR4D11Q8NGI4 311 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 DHRS1Q96LJ7 313 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 SF3B5Q9BWJ5 86 aaKnown RBP18.02■□□□□ 0.48
PTPRU-203ENST00000415600 TRIM2Q9C040 744 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 ADAM19Q9H013 955 aa18.02■□□□□ 0.48
PTPRU-203ENST00000415600 BARX1Q9HBU1 254 aaPredicted RBP18.02■□□□□ 0.48
PTPRU-203ENST00000415600 ZNF443Q9Y2A4 671 aaPredicted RBP18.02■□□□□ 0.48
PTPRU-203ENST00000415600 NSD1Q96L73 2696 aaPredicted RBP18.02■□□□□ 0.48
PTPRU-203ENST00000415600 HIVEP2P31629 2446 aa18.02■□□□□ 0.47
PTPRU-203ENST00000415600 DPPA5A6NC42 116 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 DPRXA6NFQ7 191 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 ADAM11O75078 769 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 ANXA8P13928 327 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 CDH11P55287 796 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 IL18R1Q13478 541 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 MICAQ29983 383 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 DHRS4L2Q6PKH6 230 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 ZNF836Q6ZNA1 936 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 COMTD1Q86VU5 262 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 C17orf78Q8N4C9 275 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 C1orf162Q8NEQ5 155 aaPredicted RBP18.01■□□□□ 0.47
PTPRU-203ENST00000415600 KBTBD8Q8NFY9 601 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 OR10G2Q8NGC3 310 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 VANGL1Q8TAA9 524 aaPredicted RBP18.01■□□□□ 0.47
PTPRU-203ENST00000415600 DNAJA3Q96EY1 480 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 MUS81Q96NY9 551 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 RLIMQ9NVW2 624 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 POU2F3Q9UKI9 436 aa18.01■□□□□ 0.47
PTPRU-203ENST00000415600 LOC100130705A0A1B0GUX0 176 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 ARRDC5A6NEK1 342 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 A8MVM7 634 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 ABCD4O14678 606 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 FFAR1O14842 300 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 MITFO75030 526 aaPredicted RBP18■□□□□ 0.47
PTPRU-203ENST00000415600 VAMP5O95183 116 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 DANCRP0C864 163 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 PRKAR1BP31321 381 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 RPS6KA3P51812 740 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 PLAURQ03405 335 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 APOFQ13790 326 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 KCTD21Q4G0X4 260 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms