RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 SUCLG1P53597 346 aaKnown RBP3.94□□□□□ -1.78
PTPRK-210ENST00000415055 PGGT1BP53609 377 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 HADHBP55084 474 aaKnown RBP3.94□□□□□ -1.78
PTPRK-210ENST00000415055 CDKN2DP55273 166 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 CLDN20P56880 219 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 TNFRSF17Q02223 184 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 LGALS3BPQ08380 585 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 STX5Q13190 355 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 SCGB2A2Q13296 93 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 SNTA1Q13424 505 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 DDX39BQ13838 428 aaKnown RBP3.94□□□□□ -1.78
PTPRK-210ENST00000415055 SPA17Q15506 151 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 TAB1Q15750 504 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 BCL2A1Q16548 175 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 C18orf21Q32NC0 220 aaPredicted RBP3.94□□□□□ -1.78
PTPRK-210ENST00000415055 HSP90AA5PQ58FG0 334 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 DCAF12L2Q5VW00 463 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 C18orf63Q68DL7 685 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 HIST2H2AA3Q6FI13 130 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 SLC18B1Q6NT16 456 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 FAM122CQ6P4D5 195 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 ZBTB49Q6ZSB9 765 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 NUP54Q7Z3B4 507 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 PEX26Q7Z412 305 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 LUZP1Q86V48 1076 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 GPR180Q86V85 440 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 EXOC3L1Q86VI1 746 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 MUC15Q8N387 334 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 LRRC17Q8N6Y2 441 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 OR6K3Q8NGY3 331 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 OCC1Q8TAD7 63 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 WDR20Q8TBZ3 569 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 C1orf54Q8WWF1 131 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 HSD17B8Q92506 261 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 ANKRD7Q92527 254 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 ADIPOR1Q96A54 375 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 MUCL1Q96DR8 90 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 MUS81Q96NY9 551 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 FOXN4Q96NZ1 517 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 NAP1L3Q99457 506 aaPredicted RBP3.94□□□□□ -1.78
PTPRK-210ENST00000415055 GFI1Q99684 422 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 TBCDQ9BTW9 1192 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 ZNF350Q9GZX5 532 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 DSN1Q9H410 356 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 FN3KQ9H479 309 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 ZNF696Q9H7X3 374 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 WDR41Q9HAD4 459 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 IARS2Q9NSE4 1012 aaKnown RBP3.94□□□□□ -1.78
PTPRK-210ENST00000415055 CBLN4Q9NTU7 201 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 PHF11Q9UIL8 331 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 MCTS1Q9ULC4 181 aaKnown RBP3.94□□□□□ -1.78
PTPRK-210ENST00000415055 PACSIN2Q9UNF0 486 aaPredicted RBP3.94□□□□□ -1.78
PTPRK-210ENST00000415055 ZNF337Q9Y3M9 751 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 FKBP7Q9Y680 259 aa3.94□□□□□ -1.78
PTPRK-210ENST00000415055 NPIPA5A0A0B4J1W7 369 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 A0A1W2PPM1 405 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 SHISA9B4DS77 424 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 NPIPA7E9PJI5 369 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 GOLGA8MH3BSY2 632 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 J3QR06 171 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 TO15178 435 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 UGT2B11O75310 529 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 OPN1LWP04000 364 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 CLPSP04118 112 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 CT62P0C5K7 136 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 OR2T7P0C7T2 308 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 NPIPA8P0DM63 369 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 PIK3R1P27986 724 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 IL12BP29460 328 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 TIA1P31483 386 aaKnown RBP eCLIP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 PTGDSP41222 190 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 SLC6A8P48029 635 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 ENTPD1P49961 510 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 DSCR4P56555 118 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 BPIFB3P59826 476 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 IGLV3-21P80748 117 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 SARNPP82979 210 aaKnown RBP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 HMGCS1Q01581 520 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 CHRNB3Q05901 458 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 EXOSC7Q15024 291 aaKnown RBP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 PPA1Q15181 289 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 OASLQ15646 514 aaKnown RBP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 KCTD19Q17RG1 926 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 ADPRMQ3LIE5 342 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 KLHL26Q53HC5 615 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 FBXO48Q5FWF7 155 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 C10orf25Q5T742 122 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 RNASEH2BQ5TBB1 312 aaKnown RBP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 LGSNQ5TDP6 509 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 SEL1L2Q5TEA6 688 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 OR4C11Q6IEV9 310 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 BHLHA15Q7RTS1 189 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 ZC3HC1Q86WB0 502 aaKnown RBP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 OR52B6Q8NGF0 335 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 FAM216AQ8WUB2 273 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 HGDQ93099 445 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 TMBIM1Q969X1 311 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 MRPL24Q96A35 216 aaKnown RBP3.93□□□□□ -1.78
PTPRK-210ENST00000415055 MOB3AQ96BX8 217 aa3.93□□□□□ -1.78
PTPRK-210ENST00000415055 ORAI1Q96D31 301 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms