RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 FNDC11Q9BVV2 318 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 ULBP2Q9BZM5 246 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 SPAG4Q9NPE6 437 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 MEPEQ9NQ76 525 aaPredicted RBP9.79□□□□□ -0.84
RFFL-204ENST00000414419 TAS2R5Q9NYW4 299 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 ADA2Q9NZK5 511 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 MTORP42345 2549 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 C2CD3Q4AC94 2353 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 A0A1W2PRG6 482 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 HTR3EA5X5Y0 456 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 MCIDASD6RGH6 385 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 ATP6V1G2-DDX39BF2Z307 99 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 OVOL3O00110 214 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 DCTN3O75935 186 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 OR7A10O76100 309 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 BCL10O95999 233 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 SERPINA1P01009 418 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 IGF2P01344 180 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 INHBBP09529 407 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 ASAH2BP0C7U1 165 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 APOBEC3AP31941 199 aaPredicted RBP9.78□□□□□ -0.84
RFFL-204ENST00000414419 YAP1P46937 504 aaKnown RBP9.78□□□□□ -0.84
RFFL-204ENST00000414419 UGT2B15P54855 530 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 CHRNB3Q05901 458 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 ETFDHQ16134 617 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 PHYHD1Q5SRE7 291 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 ZNF544Q6NX49 715 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 C8orf82Q6P1X6 216 aaPredicted RBP9.78□□□□□ -0.84
RFFL-204ENST00000414419 ZNF813Q6ZN06 617 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 CBLL1Q75N03 491 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 HDDC2Q7Z4H3 204 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 VTCN1Q7Z7D3 282 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 BIVMQ86UB2 503 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 DTX2Q86UW9 622 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 CYP4Z1Q86W10 505 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 OR6X1Q8NH79 312 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 PFN4Q8NHR9 129 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 GEMIN6Q8WXD5 167 aaKnown RBP9.78□□□□□ -0.84
RFFL-204ENST00000414419 ZNF566Q969W8 418 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 ZNF837Q96EG3 531 aaPredicted RBP9.78□□□□□ -0.84
RFFL-204ENST00000414419 LRRC37BQ96QE4 947 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 GRIP2Q9C0E4 1043 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 DLL4Q9NR61 685 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 CBLN4Q9NTU7 201 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 GMPR2Q9P2T1 348 aaKnown RBP9.78□□□□□ -0.84
RFFL-204ENST00000414419 RPS6KA6Q9UK32 745 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 MOKQ9UQ07 419 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 ARL2BPQ9Y2Y0 163 aa9.78□□□□□ -0.84
RFFL-204ENST00000414419 IGHV1-18A0A0C4DH31 117 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 FAM171A2A8MVW0 826 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 VSTM5A8MXK1 200 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 H7C1Q1 480 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 ENTPD5O75356 428 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 SEC14L2O76054 403 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 CD8AP01732 235 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 CD79AP11912 226 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 CBR1P16152 277 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 NCK1P16333 377 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 ARR3P36575 388 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 RIPPLY3P57055 190 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 CLRN1P58418 232 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 NPRL3Q12980 569 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 MELKQ14680 651 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 CLEC12BQ2HXU8 276 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 C3orf36Q3SXR2 165 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 GLYATQ6IB77 296 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 RRM2BQ7LG56 351 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 SLC46A3Q7Z3Q1 461 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 CDK20Q8IZL9 346 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 FAM169BQ8N8A8 192 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 NANOS1Q8WY41 292 aaKnown RBP9.77□□□□□ -0.85
RFFL-204ENST00000414419 SLC25A44Q96H78 314 aaPredicted RBP9.77□□□□□ -0.85
RFFL-204ENST00000414419 FOXB1Q99853 325 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 KATNB1Q9BVA0 655 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 NELFAQ9H3P2 528 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 BARX1Q9HBU1 254 aaPredicted RBP9.77□□□□□ -0.85
RFFL-204ENST00000414419 INIPQ9NRY2 104 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 C20orf141Q9NUB4 165 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 GLTPQ9NZD2 209 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 RHCGQ9UBD6 479 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 ABCD2Q9UBJ2 740 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 A4GNTQ9UNA3 340 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 FAM32AQ9Y421 112 aaKnown RBP9.77□□□□□ -0.85
RFFL-204ENST00000414419 PMF1-BGLAPU3KQ54 211 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 ARFGEF3Q5TH69 2177 aa9.77□□□□□ -0.85
RFFL-204ENST00000414419 DYNC1I1O14576 645 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 SMAD7O15105 426 aaKnown RBP9.76□□□□□ -0.85
RFFL-204ENST00000414419 IGHG1P01857 330 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 F13BP05160 661 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 CECR9P0C854 216 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 SAGP10523 405 aaPredicted RBP9.76□□□□□ -0.85
RFFL-204ENST00000414419 IFI30P13284 250 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 B4GALT1P15291 398 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 DAP3P51398 398 aaKnown RBP9.76□□□□□ -0.85
RFFL-204ENST00000414419 IDH3GP51553 393 aaPredicted RBP9.76□□□□□ -0.85
RFFL-204ENST00000414419 MXRA7P84157 204 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 NAAAQ02083 359 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 RPL18Q07020 188 aaKnown RBP9.76□□□□□ -0.85
RFFL-204ENST00000414419 TRAM2Q15035 370 aa9.76□□□□□ -0.85
RFFL-204ENST00000414419 RAB35Q15286 201 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms