RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 KLF7O75840 302 aaPredicted RBP15.41■□□□□ 0.06
PTPRC-206ENST00000413409 SULT1C4O75897 302 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 TXNDC12O95881 172 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 LALBAP00709 142 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 CD14P08571 375 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 HIST1H1CP16403 213 aaKnown RBP15.41■□□□□ 0.06
PTPRC-206ENST00000413409 PPP5CP53041 499 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 SOX8P57073 446 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 TAS2R43P59537 309 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 ZNF45Q02386 682 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 EGR4Q05215 589 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 RGS21Q2M5E4 152 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 C5orf46Q6UWT4 87 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 MARCH3Q86UD3 253 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 LRRC17Q8N6Y2 441 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 LRRC75AQ8NAA5 344 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 MINDY2Q8NBR6 621 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 CLEC1AQ8NC01 280 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 SDR9C7Q8NEX9 313 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 ATP6V1C2Q8NEY4 427 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 OR52E2Q8NGJ4 325 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 OR5L2Q8NGL0 311 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 CRB3Q9BUF7 120 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 NMNAT2Q9BZQ4 307 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 RTN4RQ9BZR6 473 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 NUAK2Q9H093 628 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 OR51V1Q9H2C8 321 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 SMURF1Q9HCE7 757 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 TRIM36Q9NQ86 728 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 NANSQ9NR45 359 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 TBCCD1Q9NVR7 557 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 GSTK1Q9Y2Q3 226 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 NPFFR2Q9Y5X5 522 aa15.41■□□□□ 0.06
PTPRC-206ENST00000413409 TRAV36DV7A0A075B6V5 113 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 IGHV3-20A0A0C4DH32 117 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 ZC3H12DA2A288 527 aaKnown RBP15.4■□□□□ 0.06
PTPRC-206ENST00000413409 LRRN3E7EW58 273 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 MT-ND5P03915 603 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 HLA-DPB1P04440 258 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 CD99P14209 185 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 RORCP51449 518 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 POLR2HP52434 150 aaKnown RBP15.4■□□□□ 0.06
PTPRC-206ENST00000413409 SLC25A1P53007 311 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 DLX5P56178 289 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.4■□□□□ 0.06
PTPRC-206ENST00000413409 C11orf91Q3C1V1 193 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 EMC4Q5J8M3 183 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 FCRLBQ6BAA4 426 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 DESI1Q6ICB0 168 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 NANOGNBQ7Z5D8 188 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 ARIH2OSQ8N7S6 290 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 CYB561A3Q8NBI2 242 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 OR10H4Q8NGA5 316 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 B4GALNT2Q8NHY0 566 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 HGDQ93099 445 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 FER1L6-AS2Q96M78 137 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 CNN2Q99439 309 aaKnown RBP15.4■□□□□ 0.06
PTPRC-206ENST00000413409 DDOQ99489 341 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 NOX1Q9Y5S8 564 aa15.4■□□□□ 0.06
PTPRC-206ENST00000413409 TRBV11-1A0A0K0K1C0 115 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 PNMA8CA0A1B0GUJ8 204 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 MT-ATP6P00846 226 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 BGLAPP02818 100 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 CXCR1P25024 350 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 RPS19P39019 145 aaKnown RBP15.39■□□□□ 0.05
PTPRC-206ENST00000413409 HTR3AP46098 478 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 TDGF1P3P51864 188 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 CDSNQ15517 529 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 TRAM1Q15629 374 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 ZNF324BQ6AW86 544 aaPredicted RBP15.39■□□□□ 0.05
PTPRC-206ENST00000413409 VASNQ6EMK4 673 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 FAM122BQ7Z309 247 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 GRINAQ7Z429 371 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 BTLAQ7Z6A9 289 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 LSRQ86X29 649 aaPredicted RBP15.39■□□□□ 0.05
PTPRC-206ENST00000413409 NPEPL1Q8NDH3 523 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 OR6S1Q8NH40 331 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 OR4K13Q8NH42 304 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 MOSPD2Q8NHP6 518 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 GPR119Q8TDV5 335 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 NANOS1Q8WY41 292 aaKnown RBP15.39■□□□□ 0.05
PTPRC-206ENST00000413409 SMPDL3BQ92485 455 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 SLC25A46Q96AG3 418 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 TMCO6Q96DC7 493 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 MRPL48Q96GC5 212 aaKnown RBP15.39■□□□□ 0.05
PTPRC-206ENST00000413409 WDFY2Q96P53 400 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 TIMP4Q99727 224 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 KATNB1Q9BVA0 655 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 P4HTMQ9NXG6 502 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 BABAM2Q9NXR7 383 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 TAS2R10Q9NYW0 307 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 ADAM18Q9Y3Q7 739 aa15.39■□□□□ 0.05
PTPRC-206ENST00000413409 PRRC2AP48634 2157 aaKnown RBP15.38■□□□□ 0.05
PTPRC-206ENST00000413409 LOC102723996A0A087X1L8 192 aa15.38■□□□□ 0.05
PTPRC-206ENST00000413409 SCO2O43819 266 aa15.38■□□□□ 0.05
PTPRC-206ENST00000413409 SDHAP31040 664 aa15.38■□□□□ 0.05
PTPRC-206ENST00000413409 TMED10P49755 219 aaKnown RBP15.38■□□□□ 0.05
PTPRC-206ENST00000413409 DIO1P49895 249 aa15.38■□□□□ 0.05
PTPRC-206ENST00000413409 SLC16A1P53985 500 aa15.38■□□□□ 0.05
PTPRC-206ENST00000413409 FOXL2P58012 376 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms