RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 LETMD1Q6P1Q0 360 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 VRK3Q8IV63 474 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 WDR31Q8NA23 367 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SLC7A6Q92536 515 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 NSUN4Q96CB9 384 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CMBLQ96DG6 245 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 TVP23CQ96ET8 276 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SEC22AQ96IW7 307 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SLC25A51Q9H1U9 297 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 WDR13Q9H1Z4 485 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PLK3Q9H4B4 646 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SPANXB1Q9NS25 103 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CYSLTR1Q9Y271 337 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 C5orf60A6NFR6 353 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ZFP92A6NM28 416 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 NOBOXO60393 691 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SLCO2B1O94956 709 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PYCR1P32322 319 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CRHR1P34998 444 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 COMPP49747 757 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 SLC9A3R2Q15599 337 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ODF4Q2M2E3 257 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 CLLU1Q5K131 121 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ELFN2Q5R3F8 820 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 PWWP2BQ6NUJ5 590 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ZCCHC10Q8TBK6 192 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ZNF845Q96IR2 970 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 FCRL1Q96LA6 429 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ST6GALNAC5Q9BVH7 336 aa4.28□□□□□ -1.72
PTPN13-202ENST00000411767 FCF1Q9Y324 198 aaKnown RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 ZNF608Q9ULD9 1512 aaPredicted RBP4.28□□□□□ -1.72
PTPN13-202ENST00000411767 LRRC10BA6NIK2 292 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 KDM4EB2RXH2 506 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SYN3O14994 580 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 WNT11O96014 354 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 F12P00748 615 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OPN1SWP03999 348 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ASGR2P07307 311 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 MMP11P24347 488 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TMPRSS3P57727 454 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ERVFRD-1P60508 538 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 C17orf67Q0P5P2 114 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 RIGQ13278 110 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 NCR3LG1Q68D85 454 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF324BQ6AW86 544 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 WBP2NLQ6ICG8 309 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM207Q6UWW9 146 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SCCPDHQ8NBX0 429 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 IGDCC4Q8TDY8 1250 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR5M11Q96RB7 305 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 DUSP26Q9BV47 211 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 C6orf106Q9H6K1 298 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ZCCHC17Q9NP64 241 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OBP2BQ9NPH6 170 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 MS4A12Q9NXJ0 267 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 GABRQQ9UN88 632 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 KCNK6Q9Y257 313 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 KIAA1107Q9UPP5 1409 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 A0A1W2PPQ1 181 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 MYADML2A6NDP7 307 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR2W5A6NFC9 320 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 hCG_2039718K7EN88 272 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SULT2B1O00204 365 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 NKX2-8O15522 239 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 LDB3O75112 727 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 COX5AP20674 150 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 PTGER3P43115 390 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SLC6A8P48029 635 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 GTF2A2P52657 109 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 LSM11P83369 360 aaKnown RBP eCLIP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 PJVKQ0ZLH3 352 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SEMA3BQ13214 749 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 RBMY1FQ15415 496 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 KHDC3LQ587J8 217 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR5D13Q8NGL4 314 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SLC38A5Q8WUX1 472 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 SGPP1Q9BX95 441 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 C20orf27Q9GZN8 174 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 YTHDC2Q9H6S0 1430 aaKnown RBP4.27□□□□□ -1.73
PTPN13-202ENST00000411767 DISP1Q96F81 1524 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TRAV20A0A0B4J274 112 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 F8WEM9 126 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ACOT8O14734 319 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 IGHDP01880 384 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 IGFBP4P22692 258 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 CCR9P51686 369 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ERVS71-1P61550 626 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 PAFAH1B2P68402 229 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 INCA1Q0VD86 236 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 FAM171A1Q5VUB5 890 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ANKRD13BQ86YJ7 626 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OR2V1Q8NHB1 315 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 IL1F10Q8WWZ1 152 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 CMTM7Q96FZ5 175 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TKTL2Q9H0I9 626 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 BANF2Q9H503 90 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 ADGRL4Q9HBW9 690 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 OXSMQ9NWU1 459 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 IGSF9Q9P2J2 1179 aa4.27□□□□□ -1.73
PTPN13-202ENST00000411767 TRAPPC8Q9Y2L5 1435 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms