RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 RPS21P63220 83 aaKnown RBP0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZNF616Q08AN1 781 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 FAM78AQ5JUQ0 283 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 BEND3Q5T5X7 828 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 ISLR2Q6UXK2 745 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZNF493Q6ZR52 646 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 SNX32Q86XE0 403 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 SLC35F2Q8IXU6 374 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 MREGQ8N565 214 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 MRPL43Q8N983 215 aaKnown RBP0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 FNDC5Q8NAU1 212 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 MGARPQ8TDB4 240 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 SPRYD4Q8WW59 207 aaPredicted RBP0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 PELI1Q96FA3 418 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 C4orf36Q96KX1 117 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 AMDHD1Q96NU7 426 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 FAM111AQ96PZ2 611 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 TMEM237Q96Q45 408 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZNF382Q96SR6 550 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 SULT4A1Q9BR01 284 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZNF717Q9BY31 904 aaPredicted RBP0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 GBA3Q9H227 469 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 LHX5Q9H2C1 402 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 LINC00597Q9H2U6 94 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 YY1AP1Q9H869 796 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 GIN1Q9NXP7 522 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 NOL7Q9UMY1 257 aaKnown RBP0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 PACSIN2Q9UNF0 486 aaPredicted RBP0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 SIGLEC9Q9Y336 463 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 ABCC9O60706 1549 aa0.74□□□□□ -2.29
RNU2-54P-201ENST00000410299 FANCIQ9NVI1 1328 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 IGLV3-22A0A075B6J6 115 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 A0A1B0GVI7 797 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 BCAS1O75363 584 aaPredicted RBP0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 SCGB2A1O75556 95 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 SLC25A14O95258 325 aaPredicted RBP0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 GAPDHP04406 335 aaKnown RBP0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 BCHEP06276 602 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 OR56A5P0C7T3 313 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 LGALS3P17931 250 aaKnown RBP0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 TGFBR1P36897 503 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 PDZK1IP1Q13113 114 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 BAMBIQ13145 260 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 IL15RAQ13261 267 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 PLD1Q13393 1074 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 C1orf61Q13536 156 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 GINS1Q14691 196 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 POU2AF1Q16633 256 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 KRTAP13-4Q3LI77 160 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 RAB12Q6IQ22 244 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 PLBD1Q6P4A8 553 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 BLOC1S2Q6QNY1 142 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 DUX4L9Q6RFH8 374 aaPredicted RBP0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 PIANPQ8IYJ0 282 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 LRRC52Q8N7C0 313 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 IPMKQ8NFU5 416 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 OR52H1Q8NGJ2 320 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 OR1F12Q8NHA8 337 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 UFD1Q92890 307 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 EFHD2Q96C19 240 aaPredicted RBP0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 TM4SF18Q96CE8 201 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 TVP23CQ96ET8 276 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 NARS2Q96I59 477 aaKnown RBP0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 C7orf34Q96L11 122 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 SECISBP2Q96T21 854 aaKnown RBP0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 CCT7Q99832 543 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 RAB34Q9BZG1 259 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 LY9Q9HBG7 655 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 MOSPD1Q9UJG1 213 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 PIN4Q9Y237 131 aaKnown RBP0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZSWIM8A7E2V4 1837 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 ADGRL1O94910 1474 aa0.73□□□□□ -2.29
RNU2-54P-201ENST00000410299 TRIP11Q15643 1979 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 IGHV3-74A0A0B4J1X5 117 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 ZNF878C9JN71 531 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 F5H6K3 240 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 F8WDY8 70 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 BTN3A3O00478 584 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 HSD17B6O14756 317 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 CHST1O43916 411 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 RP2O75695 350 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 ATP5LO75964 103 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 AP2A1O95782 977 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 MT-ND3P03897 115 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 HMGB2P26583 209 aaKnown RBP0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 HTR2AP28223 471 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 IL12AP29459 219 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 CCND2P30279 289 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 RDXP35241 583 aaKnown RBP0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 OPRK1P41145 380 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 CSNK1A1P48729 337 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 CCR8P51685 355 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 CRYBB1P53674 252 aaPredicted RBP0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 CDH4P55283 916 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 GMFBP60983 142 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 ERVK-25P63136 954 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 KLRC3Q07444 240 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 PIGHQ14442 188 aaPredicted RBP0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 PON3Q15166 354 aa0.72□□□□□ -2.29
RNU2-54P-201ENST00000410299 DUSP7Q16829 419 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms