RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ATE1O95260 518 aa27.29■■□□□ 1.96
TRAF3IP1-203ENST00000409739 F13BP05160 661 aa27.29■■□□□ 1.96
TRAF3IP1-203ENST00000409739 CD3EP07766 207 aa27.29■■□□□ 1.96
TRAF3IP1-203ENST00000409739 DNASE1P24855 282 aa27.29■■□□□ 1.96
TRAF3IP1-203ENST00000409739 MOSPD2Q8NHP6 518 aa27.29■■□□□ 1.96
TRAF3IP1-203ENST00000409739 BCL2L2Q92843 193 aaPredicted RBP27.29■■□□□ 1.96
TRAF3IP1-203ENST00000409739 PIP5K1AQ99755 562 aa27.29■■□□□ 1.96
TRAF3IP1-203ENST00000409739 CCM2LQ9NUG4 571 aaPredicted RBP27.29■■□□□ 1.96
TRAF3IP1-203ENST00000409739 HIF3AQ9Y2N7 669 aa27.29■■□□□ 1.96
TRAF3IP1-203ENST00000409739 PRRC2AP48634 2157 aaKnown RBP27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 SAGP10523 405 aaPredicted RBP27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 ITGA2P17301 1181 aa27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 ZNF83P51522 516 aa27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 RPS4XP62701 263 aaKnown RBP27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 FGD3Q5JSP0 725 aa27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 LCN8Q6JVE9 175 aa27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 PODNL1Q6PEZ8 512 aa27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 KLHL24Q6TFL4 600 aa27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 CLPTM1LQ96KA5 538 aa27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 B3GAT2Q9NPZ5 323 aa27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 INIPQ9NRY2 104 aa27.28■■□□□ 1.96
TRAF3IP1-203ENST00000409739 CLOCKO15516 846 aa27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 GPR4P46093 362 aa27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 CSNK1A1P48729 337 aa27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 PRPS1P60891 318 aa27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 ARF1P84077 181 aaKnown RBP27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 KEAP1Q14145 624 aa27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 TRIM25Q14258 630 aaKnown RBP27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 MTX3Q5HYI7 312 aa27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 C1QTNF12Q5T7M4 302 aa27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 ANKRD16Q6P6B7 361 aa27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 OR6N1Q8NGY5 312 aa27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 MCUR1Q96AQ8 359 aa27.27■■□□□ 1.96
TRAF3IP1-203ENST00000409739 A0A096LPE4 126 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TRBV4-1A0A0J9YWV2 114 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 A0A1W2PPZ6 126 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 A0A1W2PRG6 482 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 BCL10O95999 233 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 FABP3P05413 133 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 CD53P19397 219 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 MS4A2Q01362 244 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ACKR1Q16570 336 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 KBTBD8Q8NFY9 601 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 OR13C2Q8NGS9 318 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 MAGEE2Q8TD90 523 aaPredicted RBP27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TMEM54Q969K7 222 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SLC25A44Q96H78 314 aaPredicted RBP27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 C1QTNF6Q9BXI9 259 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ULBP2Q9BZM5 246 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 IL1RAPQ9NPH3 570 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 OBP2BQ9NPH6 170 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 MAGED1Q9Y5V3 778 aaPredicted RBP27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 CELSR1Q9NYQ6 3014 aa27.26■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TRAV27A0A087WT01 109 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TCRBV5S2A0A599 114 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ZNF99A8MXY4 864 aaPredicted RBP27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 EFCAB9A8MZ26 197 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 WNT11O96014 354 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 PGA4P0DJD7 388 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 PGA3P0DJD8 388 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 FHL1Q13642 323 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 LAPTM4AQ15012 233 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ADAM5Q6NVV9 412 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 KLHL17Q6TDP4 642 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 RRM2BQ7LG56 351 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 DHFR2Q86XF0 187 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ASB10Q8WXI3 467 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ZNF566Q969W8 418 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 CCDC124Q96CT7 223 aaKnown RBP27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 FUZQ9BT04 418 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 THTPAQ9BU02 230 aa27.25■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ARPC4-TTLL3A0A0A6YYG9 625 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 M0R1B8 84 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ABCD4O14678 606 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 HS3ST1O14792 307 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SEC14L2O76054 403 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SLC9A3P48764 834 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 DAP3P51398 398 aaKnown RBP27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SPIBQ01892 262 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SEC23BQ15437 767 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ALG10Q5BKT4 473 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TMEM108Q6UXF1 575 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 C20orf204Q6ZNR8 217 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TMPRSS11FQ6ZWK6 438 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 CDK20Q8IZL9 346 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 OR52J3Q8NH60 311 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 LILRB1Q8NHL6 650 aaPredicted RBP27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 AKAP1Q92667 903 aaKnown RBP eCLIP27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 MBD6Q96DN6 1003 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ASB9Q96DX5 294 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TMEM5Q9Y2B1 443 aa27.24■■□□□ 1.95
TRAF3IP1-203ENST00000409739 MCIDASD6RGH6 385 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 CDC42EP2O14613 210 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 PTAFRP25105 342 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 CD40P25942 277 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 UBE2NP61088 152 aaKnown RBP27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TESK1Q15569 626 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 OAFQ86UD1 273 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ZDHHC21Q8IVQ6 265 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 OR51A7Q8NH64 312 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms