RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SLC16A1P53985 500 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 CLDN17P56750 224 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 DBPQ10586 325 aaPredicted RBP18.22■□□□□ 0.51
CHKB-201ENST00000406938 TMEM201Q5SNT2 666 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 FAM205BPQ63HN1 556 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 CXXC5Q7LFL8 322 aaKnown RBP18.22■□□□□ 0.51
CHKB-201ENST00000406938 CPOQ8IVL8 374 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 ZNF786Q8N393 782 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 BBS1Q8NFJ9 593 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 OTULINQ96BN8 352 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 ZNF385AQ96PM9 386 aaKnown RBP18.22■□□□□ 0.51
CHKB-201ENST00000406938 TRIB1Q96RU8 372 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 HCAR1Q9BXC0 346 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 MED20Q9H944 212 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 CLN6Q9NWW5 311 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 ING1Q9UK53 422 aaPredicted RBP18.22■□□□□ 0.51
CHKB-201ENST00000406938 FLVCR1Q9Y5Y0 555 aa18.22■□□□□ 0.51
CHKB-201ENST00000406938 A6NIZ1 184 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 KDM4EB2RXH2 506 aaPredicted RBP18.21■□□□□ 0.51
CHKB-201ENST00000406938 PRR23D1E9PI22 279 aaPredicted RBP18.21■□□□□ 0.51
CHKB-201ENST00000406938 ENTPD6O75354 484 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 TGM6O95932 706 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 TPOP07202 933 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 PRR23D2P0DMB1 279 aaPredicted RBP18.21■□□□□ 0.51
CHKB-201ENST00000406938 FCGR2AP12318 317 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 PAICSP22234 425 aaKnown RBP18.21■□□□□ 0.51
CHKB-201ENST00000406938 ACVR2AP27037 513 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 RAP1BP61224 184 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 RAP1AP62834 184 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 TEKQ02763 1124 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 OCLNQ16625 522 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 ACSF3Q4G176 576 aaPredicted RBP18.21■□□□□ 0.51
CHKB-201ENST00000406938 SLC25A30Q5SVS4 291 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 C6orf141Q5SZD1 244 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 ZNF585AQ6P3V2 769 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 ZIC4Q8N9L1 334 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 ZNF582Q96NG8 517 aaPredicted RBP18.21■□□□□ 0.51
CHKB-201ENST00000406938 DDOQ99489 341 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 KLHL9Q9P2J3 617 aa18.21■□□□□ 0.51
CHKB-201ENST00000406938 SLC35F4A4IF30 521 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 OR6C68A6NDL8 312 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 NUDT6P53370 316 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 AADACL4Q5VUY2 407 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 GFRALQ6UXV0 394 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 HDDC2Q7Z4H3 204 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 CD163Q86VB7 1156 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 OR9Q1Q8NGQ5 310 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 OR6X1Q8NH79 312 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 HDAC2Q92769 488 aaKnown RBP18.2■□□□□ 0.5
CHKB-201ENST00000406938 ZNF775Q96BV0 537 aaPredicted RBP18.2■□□□□ 0.5
CHKB-201ENST00000406938 SPTA1P02549 2419 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 IGKV3D-15A0A087WSY6 115 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 PRSS37A4D1T9 235 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 AHRRA9YTQ3 701 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 SMNDC1O75940 238 aaKnown RBP eCLIP18.2■□□□□ 0.56e-8■■■□□ 19.1
CHKB-201ENST00000406938 ABOP16442 354 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 CHN2P52757 468 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 RNPS1Q15287 305 aaKnown RBP18.2■□□□□ 0.5
CHKB-201ENST00000406938 MEDAGQ5VYS4 303 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 NXNL2Q5VZ03 156 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 FAM57AQ8TBR7 257 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 PTP4A1Q93096 173 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 ADAD1Q96M93 576 aaKnown RBP18.2■□□□□ 0.5
CHKB-201ENST00000406938 Q96MT0 163 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 KCNK17Q96T54 332 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 SYT4Q9H2B2 425 aa18.2■□□□□ 0.5
CHKB-201ENST00000406938 RPRD1BQ9NQG5 326 aaKnown RBP18.2■□□□□ 0.5
CHKB-201ENST00000406938 SLC1A7O00341 560 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 XPNPEP2O43895 674 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 TRMUO75648 421 aaKnown RBP18.19■□□□□ 0.5
CHKB-201ENST00000406938 RENP00797 406 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 CLUP10909 449 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 NFATC3Q12968 1075 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 CAMK2DQ13557 499 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 NIPAL3Q6P499 406 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 P4HA3Q7Z4N8 544 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 MCEMP1Q8IX19 187 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 SYT14Q8NB59 555 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 BPIFB6Q8NFQ5 453 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 SLC25A44Q96H78 314 aaPredicted RBP18.19■□□□□ 0.5
CHKB-201ENST00000406938 SNX18Q96RF0 628 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 NMNAT2Q9BZQ4 307 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 VSX1Q9NZR4 365 aaPredicted RBP18.19■□□□□ 0.5
CHKB-201ENST00000406938 EMC3Q9P0I2 261 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 CLEC4AQ9UMR7 237 aa18.19■□□□□ 0.5
CHKB-201ENST00000406938 GPR171O14626 319 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 PRODHO43272 600 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 IGHG1P01857 330 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 GYPBP06028 91 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 PGA4P0DJD7 388 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 PGA3P0DJD8 388 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 CARD17Q5XLA6 110 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 GID4Q8IVV7 300 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 TUSC5Q8IXB3 177 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 NOXO1Q8NFA2 376 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 ZNF566Q969W8 418 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 TSSK2Q96PF2 358 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 OR2M2Q96R28 347 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 NR1H4Q96RI1 486 aaPredicted RBP18.18■□□□□ 0.5
CHKB-201ENST00000406938 MRPL13Q9BYD1 178 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms