RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 LIN9Q5TKA1 542 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 PRAMEF5Q5TYX0 476 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 PRAMEF6Q5VXH4 476 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 TPGS2Q68CL5 300 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SPOPLQ6IQ16 392 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 PPP1R2P3Q6NXS1 205 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZNF343Q6P1L6 599 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCBE1Q6UXH8 406 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 USP50Q70EL3 339 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 PAQR7Q86WK9 346 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 PHF13Q86YI8 300 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC13A5Q86YT5 568 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC22A9Q8IVM8 553 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 OR9K2Q8NGE7 335 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 OR5B17Q8NGF7 314 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC2A14Q8TDB8 520 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 AGAP11Q8TF27 550 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 ATP6V1G3Q96LB4 118 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 CLCC1Q96S66 551 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 DPH7Q9BTV6 452 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 RHBGQ9H310 441 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 LRRC19Q9H756 370 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 METTL7AQ9H8H3 244 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 TMBIM4Q9HC24 238 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SIGLEC8Q9NYZ4 499 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SPRR3Q9UBC9 169 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 PHF11Q9UIL8 331 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 PRPF19Q9UMS4 504 aaKnown RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SNX24Q9Y343 169 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 ARFGEF1Q9Y6D6 1849 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 MROH7Q68CQ1 1323 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 PSME4Q14997 1843 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 KIF13BQ9NQT8 1826 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 SMIM28A0A1B0GU29 152 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 GOLGA6L10A6NI86 522 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 DHRS7CA6NNS2 312 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 FCN1O00602 326 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 EIF3HO15372 352 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 CXCL13O43927 109 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 PRKYO43930 277 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 HCN1O60741 890 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 PROSCO94903 275 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 DIRAS1O95057 198 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 ASS1P00966 412 aaKnown RBP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 IGHG4P01861 327 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 LGALS2P05162 132 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 STSP08842 583 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 TROVE2P10155 538 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 PCMT1P22061 227 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 GCAP28676 217 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 UGT1A5P35504 534 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 TNFSF9P41273 254 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 RPL29P47914 159 aaKnown RBP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 CSRP3P50461 194 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 DAP3P51398 398 aaKnown RBP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 PRKXP51817 358 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 CRYBB1P53674 252 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 PLTPP55058 493 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 MYL6P60660 151 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 GNGT1P63211 74 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 OC90Q02509 493 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 CHRNB3Q05901 458 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 ASPHQ12797 758 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 PLD1Q13393 1074 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 TGIF1Q15583 401 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 C6orf226Q5I0X4 101 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 PDZK1Q5T2W1 519 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 AGBL2Q5U5Z8 902 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 KCTD16Q68DU8 428 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCDC137Q6PK04 289 aaKnown RBP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 METAP1DQ6UB28 335 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 KDM7AQ6ZMT4 941 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZBTB8OSQ8IWT0 167 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 ATP6V0D2Q8N8Y2 350 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 OR4D9Q8NGE8 314 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 OR52K2Q8NGK3 314 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 HTR3CQ8WXA8 447 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 PSMG2Q969U7 264 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 OPTNQ96CV9 577 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 C10orf35Q96D05 121 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCNL2Q96S94 520 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 FMO2Q99518 471 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 SOSTQ9BQB4 213 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 CAB39LQ9H9S4 337 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 MRPL47Q9HD33 250 aaKnown RBP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 BFARQ9NZS9 450 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 ADAM22Q9P0K1 906 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 DHRS4-AS1Q9P1J3 65 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 WARS2Q9UGM6 360 aaKnown RBP3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 TMCO1Q9UM00 188 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 MEMO1Q9Y316 297 aa3.7□□□□□ -1.82
HMGB3P18-201ENST00000406327 LOC100131303A0A0U1RQF7 123 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 GOLGA8OA6NCC3 632 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCDC182A6NF36 153 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCT8L1PA6NM43 557 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 TRDCB7Z8K6 153 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 E9PBE3 544 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 GOLGA8NF8WBI6 632 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms