RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TAS1R1Q7RTX1 841 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 RD3Q7Z3Z2 195 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 PHYKPLQ8IUZ5 450 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 CMTM4Q8IZR5 234 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 PLA2G15Q8NCC3 412 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 FAM71CQ8NEG0 241 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 OR56B1Q8NGI3 324 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 OR1J2Q8NGS2 313 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 FNDC9Q8TBE3 224 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SPPL3Q8TCT6 385 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 C16orf78Q8WTQ4 265 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SMIM4Q8WVI0 70 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 PEX11GQ96HA9 241 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ZNF559Q9BR84 538 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ARHGAP9Q9BRR9 750 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 HCAR1Q9BXC0 346 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 UBQLN3Q9H347 655 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ZNF701Q9NV72 531 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 TIMM8BQ9Y5J9 83 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 INSL5Q9Y5Q6 135 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 OR6C76A6NM76 312 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ZNF729A6NN14 1252 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ZNF726A6NNF4 738 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 PPP1R3DO95685 299 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 IFNA1P01562 189 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ELFN1P0C7U0 828 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 JMJD7P0C870 316 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ATP1B2P14415 290 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ZNF28P17035 718 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SERPINA2P20848 420 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 MMP11P24347 488 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ATP5A1P25705 553 aaKnown RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 PSMB6P28072 239 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 DDTP30046 118 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SLC25A35Q3KQZ1 300 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ARHGAP11BQ3KRB8 267 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 MLIPQ5VWP3 458 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 LPCAT3Q6P1A2 487 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 C1orf87Q8N0U7 546 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 MRPL43Q8N983 215 aaKnown RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 BBS1Q8NFJ9 593 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 OR4C5Q8NGB2 326 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 OR56A1Q8NGH5 318 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ZNF417Q8TAU3 575 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 KIRREL1Q96J84 757 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 LMLNQ96KR4 655 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 HS6ST2Q96MM7 605 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 LINC00597Q9H2U6 94 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 OR52D1Q9H346 318 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 RXFP3Q9NSD7 469 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 TREM2Q9NZC2 230 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ICKQ9UPZ9 632 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 DMRT1Q9Y5R6 373 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 RNF215Q9Y6U7 377 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 RP1P56715 2156 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 PCM1Q15154 2024 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 CDHR4A6H8M9 788 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ZNF840PA6NDX5 716 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 HMSDA8MTL9 139 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ERI3O43414 337 aaKnown RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 TCF21O43680 179 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ITGA5P08648 1049 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 RAB5AP20339 215 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 S1PR1P21453 382 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ITGB7P26010 798 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 FGF9P31371 208 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 XCR1P46094 333 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 CSNK1DP48730 415 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 DHPSP49366 369 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 MMP15P51511 669 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 CLDN6P56747 220 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SIRPAP78324 504 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 GLO1Q04760 184 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 TSPAN31Q12999 210 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SYPL1Q16563 259 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SGCAQ16586 387 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 EXOSC6Q5RKV6 272 aaKnown RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 PRAMEF14Q5SWL7 426 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 TFAP2EQ6VUC0 442 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 HTR3DQ70Z44 454 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 HGDQ93099 445 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 FAM46BQ96A09 425 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 CXorf40BQ96DE9 158 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 TMEM169Q96HH4 297 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 PRRC1Q96M27 445 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SMIM14Q96QK8 99 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SDHCQ99643 169 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 EXOSC3Q9NQT5 275 aaKnown RBP5.41□□□□□ -1.54
HDAC9-203ENST00000406072 TM7SF3Q9NS93 570 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SLC6A13Q9NSD5 602 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 EPHA6Q9UF33 1036 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 ASB1Q9Y576 335 aa5.41□□□□□ -1.54
HDAC9-203ENST00000406072 SCN8AQ9UQD0 1980 aa5.4□□□□□ -1.54
HDAC9-203ENST00000406072 C7orf66A4D0T2 115 aa5.4□□□□□ -1.54
HDAC9-203ENST00000406072 AQP7O14520 342 aa5.4□□□□□ -1.54
HDAC9-203ENST00000406072 MBTPS2O43462 519 aa5.4□□□□□ -1.54
HDAC9-203ENST00000406072 NFATC1O95644 943 aa5.4□□□□□ -1.54
HDAC9-203ENST00000406072 PTHLHP12272 177 aa5.4□□□□□ -1.54
HDAC9-203ENST00000406072 CXCL2P19875 107 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms