RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 CENPNQ96H22 339 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-204ENST00000405578 FUZQ9BT04 418 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 C12orf49Q9H741 205 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 INIPQ9NRY2 104 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 PDP1Q9P0J1 537 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-204ENST00000405578 KIF17Q9P2E2 1029 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 FOXD3Q9UJU5 478 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-204ENST00000405578 EDARQ9UNE0 448 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 RCE1Q9Y256 329 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 HIF3AQ9Y2N7 669 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 FLVCR1Q9Y5Y0 555 aa9.35□□□□□ -0.91
RPAIN-204ENST00000405578 ANKRD65E5RJM6 399 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 G3V2T6 193 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 MS4A18H0YCH9 400 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 RAMP1O60894 148 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 SLC43A1O75387 559 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 NDUFB2O95178 105 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 CNOT4O95628 575 aaKnown RBP9.34□□□□□ -0.91
RPAIN-204ENST00000405578 LY6G6DO95868 133 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 BCL10O95999 233 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 ADAP00813 363 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 NR2C1P13056 603 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 ANXA8P13928 327 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 ZNF23P17027 643 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 FUT4P22083 530 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 AQP2P41181 271 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 OR3A2P47893 321 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 ASCL1P50553 236 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 P2RY4P51582 365 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 CLDN17P56750 224 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.91
RPAIN-204ENST00000405578 RPL18Q07020 188 aaKnown RBP9.34□□□□□ -0.91
RPAIN-204ENST00000405578 PPP1R8Q12972 351 aaKnown RBP9.34□□□□□ -0.91
RPAIN-204ENST00000405578 TSPAN31Q12999 210 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 SNTB1Q13884 538 aaKnown RBP9.34□□□□□ -0.91
RPAIN-204ENST00000405578 GUSBP1Q15486 140 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 MS4A18Q3C1V0 323 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 PGBD2Q6P3X8 592 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 BEND4Q6ZU67 534 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 ABHD12BQ7Z5M8 362 aaPredicted RBP9.34□□□□□ -0.91
RPAIN-204ENST00000405578 BTLAQ7Z6A9 289 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 LUZP2Q86TE4 346 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 CDC20BQ86Y33 519 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 UBE2J2Q8N2K1 259 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 SVOPLQ8N434 492 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 ATG16L2Q8NAA4 619 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 OR9Q2Q8NGE9 314 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 OR13C2Q8NGS9 318 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 OR5K1Q8NHB7 308 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 DNAJC9Q8WXX5 260 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 LRTOMTQ8WZ04 291 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 ADAD1Q96M93 576 aaKnown RBP9.34□□□□□ -0.91
RPAIN-204ENST00000405578 TNFRSF13CQ96RJ3 184 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 OSBPL10Q9BXB5 764 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 S100A14Q9HCY8 104 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 PLSCR4Q9NRQ2 329 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 RASSF1Q9NS23 344 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 TAS2R5Q9NYW4 299 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 UPB1Q9UBR1 384 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 SEC14L4Q9UDX3 406 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 MXRA5Q9NR99 2828 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 HIVEP2P31629 2446 aa9.34□□□□□ -0.91
RPAIN-204ENST00000405578 CHD3Q12873 2000 aaKnown RBP9.34□□□□□ -0.91
RPAIN-204ENST00000405578 TRAV27A0A087WT01 109 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 NPIPB13A6NJU9 1138 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 A8MXE2 369 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 NPIPB4C9JG80 1138 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 CDC42EP2O14613 210 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 BAG2O95816 211 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 HPRP00739 348 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 GASTP01350 101 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 IFNGR1P15260 489 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 SLC6A6P31641 620 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 UQCRC1P31930 480 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 PEX19P40855 299 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 RPS4XP62701 263 aaKnown RBP9.33□□□□□ -0.92
RPAIN-204ENST00000405578 LAPTM4AQ15012 233 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 DEFB113Q30KQ7 82 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 FAM205BPQ63HN1 556 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 NIPAL3Q6P499 406 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 VWA1Q6PCB0 445 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 SMARCD3Q6STE5 483 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 SLC35D2Q76EJ3 337 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 NUFIP2Q7Z417 695 aaKnown RBP9.33□□□□□ -0.92
RPAIN-204ENST00000405578 MEX3DQ86XN8 651 aaKnown RBP9.33□□□□□ -0.92
RPAIN-204ENST00000405578 KIF18BQ86Y91 864 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 KRTAP1-3Q8IUG1 177 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 EPHX4Q8IUS5 362 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 LIX1LQ8IVB5 337 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 POMGNT2Q8NAT1 580 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 OR52L1Q8NGH7 329 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 FANK1Q8TC84 345 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 GTPBP3Q969Y2 492 aaKnown RBP9.33□□□□□ -0.92
RPAIN-204ENST00000405578 ZNF385AQ96PM9 386 aaKnown RBP9.33□□□□□ -0.92
RPAIN-204ENST00000405578 FEVQ99581 238 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 RBM24Q9BX46 236 aaKnown RBP9.33□□□□□ -0.92
RPAIN-204ENST00000405578 TEX12Q9BXU0 123 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 DGCR6LQ9BY27 220 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 B3GAT2Q9NPZ5 323 aa9.33□□□□□ -0.92
RPAIN-204ENST00000405578 VNN3Q9NY84 501 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms